Author Correction: Single-cell transcriptomics reveal extracellular vesicles secretion with a cardiomyocyte proteostasis signature during pathological remodeling

Authors: Eric Schoger, Federico Bleckwedel, Giulia Germena, Cheila Rocha, Petra Tucholla, Izzatullo Sobitov, Wiebke Möbius, Maren Sitte, Christof Lenz, Mostafa Samak, Rabea Hinkel, Zoltán V. Varga, Zoltán Giricz, Gabriela Salinas, Julia C. Gross, Laura C. Zelarayán

Source: Communications Biology, Vol 7, Iss 1, Pp 1-4 (2024)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/211e5acd4e8f40e392b605c7e6a15534

Proteome profiling of Campylobacter jejuni 81–176 at 37 °C and 42 °C by label-free mass spectrometry

Authors: Annika Dreyer, Wycliffe O. Masanta, Raimond Lugert, Wolfgang Bohne, Uwe Groß, Andreas Leha, Mohammed Dakna, Christof Lenz, Andreas E. Zautner

Source: BMC Microbiology, Vol 24, Iss 1, Pp 1-18 (2024)

Subject Terms: Campylobacter jejuni, Temperature changes, Proteome, Mass spectrometry, DIA-MS, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2180

Access URL: https://doaj.org/article/76169ecc6ab94128a1b9b8ec8c151eef

Comparative analysis of proteomic adaptations in Enterococcus faecalis and Enterococcus faecium after long term bile acid exposure

Authors: Annika Dreyer, Christof Lenz, Uwe Groß, Wolfgang Bohne, Andreas Erich Zautner

Source: BMC Microbiology, Vol 24, Iss 1, Pp 1-16 (2024)

Subject Terms: Enterococcus faecalis, Enterococcus faecium, DIA-MS, Proteomics, Bile acids, Resistance mechanisms, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2180

Access URL: https://doaj.org/article/924fd7489db247c08ea570d5c309b206

mini-Complexome Profiling (mCP), an FDR-controlled workflow for global targeted detection of protein complexes

Authors: Hugo Amedei, Niels Benjamin Paul, Brian Foo, Lisa Neuenroth, Stephan E. Lehnart, Henning Urlaub, Christof Lenz

Source: Frontiers in Analytical Science, Vol 4 (2024)

Subject Terms: proteome, protein complex, protein interaction, complexome, targeted proteomics, blue native, Analytical chemistry, QD71-142

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/frans.2024.1425190/full; https://doaj.org/toc/2673-9283

Access URL: https://doaj.org/article/2aede4e5fb4049c2903bdce2b375d161

Iron starvation results in up-regulation of a probable Haloferax volcanii siderophore transporter

Authors: Anna-Lena Sailer, Zivojin Jevtic, Britta Stoll, Julia Wörtz, Kundan Sharma, Henning Urlaub, Mike Dyall-Smith, Friedhelm Pfeiffer, Anita Marchfelder, Christof Lenz

Source: Frontiers in Microbiology, Vol 15 (2024)

Subject Terms: Haloferax volcanii, proteome, iron starvation, data-independent acquisition mass spectrometry, DIA-MS, import/export processes, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2024.1422844/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/24da877b59364cfcbe83d3c67617b8e1

Single-cell transcriptomics reveal extracellular vesicles secretion with a cardiomyocyte proteostasis signature during pathological remodeling

Authors: Eric Schoger, Federico Bleckwedel, Giulia Germena, Cheila Rocha, Petra Tucholla, Izzatullo Sobitov, Wiebke Möbius, Maren Sitte, Christof Lenz, Mostafa Samak, Rabea Hinkel, Zoltán V. Varga, Zoltán Giricz, Gabriela Salinas, Julia C. Gross, Laura C. Zelarayán

Source: Communications Biology, Vol 6, Iss 1, Pp 1-17 (2023)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/3e9a30bbd37f427087c641a482573fde

Uncovering the temporal dynamics and regulatory networks of thermal stress response in a hyperthermophile using transcriptomics and proteomics

Authors: Felix Grünberger, Georg Schmid, Zubeir El Ahmad, Martin Fenk, Katharina Vogl, Robert Reichelt, Winfried Hausner, Henning Urlaub, Christof Lenz, Dina Grohmann

Source: mBio, Vol 14, Iss 6 (2023)

Subject Terms: archaea, heat shock, cold shock, transcriptomics, proteomics, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2150-7511

Access URL: https://doaj.org/article/02b6ef0ee43e43e3a6d3d4b363d9ba53

Characterization of Campylobacter jejuni proteome profiles in co-incubation scenarios

Authors: Annika Dreyer, Christof Lenz, Uwe Groß, Wolfgang Bohne, Andreas Erich Zautner

Source: Frontiers in Microbiology, Vol 14 (2023)

Subject Terms: Campylobacter jejuni, co-incubation, Enterococcus faecalis, Enterococcus faecium, Staphylococcus aureus, bile acids, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2023.1247211/full; https://doaj.org/toc/1664-302X

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Calpain cleavage of Junctophilin-2 generates a spectrum of calcium-dependent cleavage products and DNA-rich NT1-fragment domains in cardiomyocytes

Authors: Gunnar Weninger, Tatiana Pochechueva, Dana El Chami, Xiaojing Luo, Tobias Kohl, Sören Brandenburg, Henning Urlaub, Kaomei Guan, Christof Lenz, Stephan E. Lehnart

Source: Scientific Reports, Vol 12, Iss 1, Pp 1-17 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/4776fbc39c47406b95dc5134504a6b9e

Proteomic mapping of atrial and ventricular heart tissue in patients with aortic valve stenosis

Authors: Boris Barbarics, Katja Eildermann, Lars Kaderali, Lukas Cyganek, Uwe Plessmann, Julius Bodemeyer, Thomas Paul, Philipp Ströbel, Henning Urlaub, Theodorus Tirilomis, Christof Lenz, Hanibal Bohnenberger

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-12 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/717cc2a46dcc498ba899c67be060d44f

Characterization of functional protein complexes from Alzheimer’s disease and healthy brain by mass spectrometry-based proteome analysis

Authors: Beena Hasan, Ayesha Khan, Christof Lenz, Abdul R. Asif, Nikhat Ahmed

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-9 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/81369126a1bc48a28f685365a727eec7

Microscopic and biochemical monitoring of endosomal trafficking and extracellular vesicle secretion in an endogenous in vivo model

Authors: Karen Linnemannstöns, Pradhipa Karuna M, Leonie Witte, Dolma Choezom, Mona Honemann‐Capito, Alex Simon Lagurin, Chantal Vanessa Schmidt, Shreya Shrikhande, Lara‐Kristin Steinmetz, Möbius Wiebke, Christof Lenz, Julia Christina Gross

Source: Journal of Extracellular Vesicles, Vol 11, Iss 9, Pp n/a-n/a (2022)

Subject Terms: Drosophila, exosomes, fat body, haemolymph, intercellular communication, Rab11, Cytology, QH573-671

File Description: electronic resource

Relation: https://doaj.org/toc/2001-3078

Access URL: https://doaj.org/article/07592a19dbb04f23b1cc54ecc3489e75

Translation error clusters induced by aminoglycoside antibiotics

Authors: Ingo Wohlgemuth, Raffaella Garofalo, Ekaterina Samatova, Aybeg Nafiz Günenç, Christof Lenz, Henning Urlaub, Marina V. Rodnina

Source: Nature Communications, Vol 12, Iss 1, Pp 1-14 (2021)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/81c575edaca14f1fa23d9fc498664242

A streamlined pipeline for multiplexed quantitative site-specific N-glycoproteomics

Authors: Pan Fang, Yanlong Ji, Ivan Silbern, Carmen Doebele, Momchil Ninov, Christof Lenz, Thomas Oellerich, Kuan-Ting Pan, Henning Urlaub

Source: Nature Communications, Vol 11, Iss 1, Pp 1-11 (2020)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/b98847062cd64d348c1ad9038cab217f

The Archaeal Proteome Project advances knowledge about archaeal cell biology through comprehensive proteomics

Authors: Stefan Schulze, Zachary Adams, Micaela Cerletti, Rosana De Castro, Sébastien Ferreira-Cerca, Christian Fufezan, María Inés Giménez, Michael Hippler, Zivojin Jevtic, Robert Knüppel, Georgio Legerme, Christof Lenz, Anita Marchfelder, Julie Maupin-Furlow, Roberto A. Paggi, Friedhelm Pfeiffer, Ansgar Poetsch, Henning Urlaub, Mechthild Pohlschroder

Source: Nature Communications, Vol 11, Iss 1, Pp 1-14 (2020)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/0711fee5132f4c3c99edbeebf14e2abc

A multiplexed parallel reaction monitoring assay to monitor bovine pregnancy-associated glycoproteins throughout pregnancy and after gestation.

Authors: Tony Krebs, Isabel Kilic, Lisa Neuenroth, Thierry Wasselin, Momchil Ninov, Jens Tetens, Christof Lenz

Source: PLoS ONE, Vol 17, Iss 9, p e0271057 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/bf7acc6538bb467482ad6de565060561

Multi‐omic landscaping of human midbrains identifies disease‐relevant molecular targets and pathways in advanced‐stage Parkinson's disease

Authors: Lucas Caldi Gomes, Ana Galhoz, Gaurav Jain, Anna‐Elisa Roser, Fabian Maass, Eleonora Carboni, Elisabeth Barski, Christof Lenz, Katja Lohmann, Christine Klein, Mathias Bähr, André Fischer, Michael P. Menden, Paul Lingor

Source: Clinical and Translational Medicine, Vol 12, Iss 1, Pp n/a-n/a (2022)

Subject Terms: data integration, miRNAs, multi‐omics, Parkinson disease, Medicine (General), R5-920

File Description: electronic resource

Relation: https://doaj.org/toc/2001-1326

Access URL: https://doaj.org/article/c1c958499e774a69ba69e7f59eb3c227

The Proteomes of Oral Cells Change during Co-Cultivation with Aggregatibacter actinomycetemcomitans and Eikenella corrodens

Authors: Boris Schminke, Philipp Kauffmann, Phillipp Brockmeyer, Nicolai Miosge, Christof Lenz, Andrea Schubert

Source: Biomedicines, Vol 11, Iss 3, p 700 (2023)

Subject Terms: proteome, gingival keratinocyte, osteoblastic lineage cell, PDL fibroblast, cementoblast, bacteria, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.mdpi.com/2227-9059/11/3/700; https://doaj.org/toc/2227-9059

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Enhancing the chondrogenic potential of chondrogenic progenitor cells by deleting RAB5C

Authors: Jerome Nicolas Janssen, Valerio Izzi, Elvira Henze, Gökhan Cingöz, Florian Lowen, David Küttner, Ruth Neumann, Christof Lenz, Vicki Rosen, Nicolai Miosge

Source: iScience, Vol 24, Iss 5, Pp 102464- (2021)

Subject Terms: Stem cells research, Omics, Proteomics, Transcriptomics, Science

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2589004221004326; https://doaj.org/toc/2589-0042

Access URL: https://doaj.org/article/6aced966dcaa47aaa8bcb0de810fe6ef

Influence of Shear Stress, Inflammation and BRD4 Inhibition on Human Endothelial Cells: A Holistic Proteomic Approach

Authors: Johannes Jarausch, Lisa Neuenroth, Reiner Andag, Andreas Leha, Andreas Fischer, Abdul R. Asif, Christof Lenz, Abass Eidizadeh

Source: Cells, Vol 11, Iss 19, p 3086 (2022)

Subject Terms: HUVEC, shear stress, endothelial, proteomic, BRD4, JQ1, Cytology, QH573-671

File Description: electronic resource

Relation: https://www.mdpi.com/2073-4409/11/19/3086; https://doaj.org/toc/2073-4409

Access URL: https://doaj.org/article/aa253b349feb4544b4c89673652f8c7a