BioBricks.ai: A Versioned Data Registry for Life Sciences Data Assets

Authors: Gao, Yifan, Mughal, Zakariyya, Jaramillo-Villegas, Jose A., Corradi, Marie, Borrel, Alexandre, Lieberman, Ben, Sharif, Suliman, Shaffer, John, Fecho, Karamarie, Chatrath, Ajay, Maertens, Alexandra, Teunis, Marc A. T., Kleinstreuer, Nicole, Hartung, Thomas, Luechtefeld, Thomas

Subject Terms: Computer Science - Databases, Quantitative Biology - Quantitative Methods

Access URL: http://arxiv.org/abs/2408.17320

Compressed spectral screening for large-scale differential correlation analysis with application in selecting Glioblastoma gene modules

Authors: Li, Tianxi, Tang, Xiwei, Chatrath, Ajay

Subject Terms: Statistics - Methodology, Statistics - Applications

Access URL: http://arxiv.org/abs/2111.03721

Spinal calcifying pseudoneoplasms of the neuraxis: A case report and review of the literature

Authors: Chatrath, Ajay, Lemieux, Mackenzie, Patel, Rujvee P., Roberts, Kaleigh F., Dahiya, Sonika, Pennicooke, Brenton

Source: In World Neurosurgery: X July 2024 23

Compressed spectral screening for large-scale differential correlation analysis with application in selecting Glioblastoma gene modules

Authors: Li, Tianxi, Tang, Xiwei, Chatrath, Ajay

Source: ANNALS OF APPLIED STATISTICS. 17(4):3450-3475

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN632806964&indx=1&recIds=ETOCRN632806964

Primary Spinal Cord Astrocytomas: Two-Center Clinical Experience of Low- and High-Grade Lesions

Authors: Snyder, M. Harrison, Yu-Der Wang, Andy, Ampie, Leonel, Sarathy, Danyas, Chatrath, Ajay, Asthagiri, Ashok R., Shaffrey, Christopher I., Smith, Justin S., Shaffrey, Mark E., Yen, Chun-Po, Buchholz, Avery L., Syed, Hasan R., Kryzanski, James, Wu, Julian K., Heilman, Carl B.

Source: In World Neurosurgery November 2022 167:e1006-e1016

Detecting molecular subtypes from multi-omics datasets using SUMO

Authors: Sienkiewicz, Karolina, Chen, Jinyu, Chatrath, Ajay, Lawson, John T., Sheffield, Nathan C., Zhang, Louxin, Ratan, Aakrosh

Source: In Cell Reports Methods 24 January 2022 2(1)

Germline Variants That Affect Tumor Progression

Authors: Chatrath, Ajay, Ratan, Aakrosh, Dutta, Anindya

Source: In Trends in Genetics May 2021 37(5):433-443

Germline variants predictive of tumor mutational burden and immune checkpoint inhibitor efficacy

Authors: Chatrath, Ajay, Ratan, Aakrosh, Dutta, Anindya

Source: In iScience 19 March 2021 24(3)

Cerebrospinal fluid area and syringogenesis in Chiari malformation type I

Authors: Taylor, Davis G., Chatrath, Ajay, Mastorakos, Panagiotis, Paisan, Gabriella, Chen, Ching-Jen, Buell, Thomas J., Jane, John A.

Source: Journal of neurosurgery. 134(3):825-830

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN625698933&indx=1&recIds=ETOCRN625698933

Stereotactic Radiosurgery for Atypical (World Health Organization II) and Anaplastic (World Health Organization III) Meningiomas: Results From a Multicenter, International Cohort Study

Authors: Shepard, Matthew J, Xu, Zhiyuan, Kearns, Kathryn, Li, Chelsea, Chatrath, Ajay, Sheehan, Kimball, Sheehan, Darrah, Faramand, Andrew, Niranjan, Ajay, Kano, Hideyuki, Gurewitz, Jason, Bernstein, Kenneth, Liscak, Roman, Guseynova, Khumar, Grills, Inga S, Parzen, Jacob S, Cifarelli, Christopher P, Rehman, Azeem A, Atik, Ahmet, Bakhsheshian, Joshua, Zada, Gabriel, Chang, Eric, Giannotta, Steven, Speckter, Herwin, Wu, Hsiu-mei, Kondziolka, Douglas, Golfinos, John G, Mathieu, David, Lee, Cheng-chia, Warnick, Ronald E, Lunsford, L Dade, Sheehan, Jason P

Source: Neurosurgery. 88(5):980-988

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100122501880.0x000001&indx=1&recIds=ETOCvdc_100122501880.0x000001

Development of a polygenic score predicting drug resistance and patient outcome in breast cancer.

Authors: Sahu, Divya, Shi, Jeffrey, Segura Rueda, Isaac Andres, Chatrath, Ajay, Dutta, Anindya

Source: NPJ Precision Oncology; 10/2/2024, Vol. 8 Issue 1, p1-11, 11p

Subject Terms: GENE expression, CANCER genes, CANCER prognosis, GENE expression profiling, CELL lines

Endovascular and Surgical Treatment Is Predictive of Readmission Risk After Aneurysmal Subarachnoid Hemorrhage

Authors: Chatrath, Ajay, Soldozy, Sauson, Sokolowski, Jennifer D., Burke, Rebecca M., Schultz, Julianne G., Rannigan, Zuseen C., Park, Min S.

Source: In World Neurosurgery October 2020 142:e494-e501

Chiari I malformation in children—the natural history

Authors: Chatrath, Ajay, Marino, Alexandria, Taylor, Davis, Elsarrag, Mazin, Soldozy, Sauson, Jane, John A.

Source: Child's nervous system. 35(10):1793-1799

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100129021871.0x000001&indx=1&recIds=ETOCvdc_100129021871.0x000001

Ganglioglioma Arising from the Septum Pellucidum: Case Report and Review of the Literature

Authors: Chatrath, Ajay, Mastorakos, Panagiotis, Mehta, Gautam U., Wildeman, Miriam, Moosa, Shayan, Jane Jr., John A.

Source: Pediatric neurosurgery. 54(1):36-45

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100084767692.0x000001&indx=1&recIds=ETOCvdc_100084767692.0x000001

Tumor to Cerebellar Peduncle T2-Weighted Imaging Intensity Ratio Fails to Predict Pituitary Adenoma Consistency

Authors: Mastorakos, Panagiotis, Mehta, Gautam, Chatrath, Ajay, Moosa, Shayan, Lopes, Maria-Beatriz, Payne, Spencer, Jane, John

Source: Journal of neurological surgery.Part B.Skull base. 80(3):252-257

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100186994053.0x000001&indx=1&recIds=ETOCvdc_100186994053.0x000001

BRAF V600 Mutation and BRAF Kinase Inhibitors in Conjunction With Stereotactic Radiosurgery for Intracranial Melanoma Metastases: A Multicenter Retrospective Study

Authors: Mastorakos, Panagiotis, Xu, Zhiyuan, Yu, James, Hess, Judith, Qian, Jack, Chatrath, Ajay, Taylor, Davis G, Kondziolka, Douglas, Warnick, Ronald, Chiang, Veronica, Sheehan, Jason

Source: Neurosurgery. 84(4):868-880

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100079492677.0x000001&indx=1&recIds=ETOCvdc_100079492677.0x000001

Stereotactic radiosurgery for brain metastases from malignant melanoma and the impact of hemorrhagic metastases

Authors: Bauer-Nilsen, Kristine, Trifiletti, Daniel M., Chatrath, Ajay, Ruiz-Garcia, Henry, Marchan, Eduardo, Peterson, Jennifer, May, Byron C., Sheehan, Jason P.

Source: Journal of neuro-oncology. 140(1):83-88

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100118722943.0x000001&indx=1&recIds=ETOCvdc_100118722943.0x000001

The pan-cancer landscape of prognostic germline variants in 10, 582 patients

Authors: Chatrath, Ajay, Przanowska, Roza, Kiran, Shashi, Su, Zhangli, Saha, Shekhar, Wilson, Briana, Tsunematsu, Takaaki, Ahn, Ji-Hye, Lee, Kyung Yong, Paulsen, Teressa, Sobierajska, Ewelina, Kiran, Manjari, Tang, Xiwei, Li, Tianxi, Kumar, Pankaj, Ratan, Aakrosh, Dutta, Anindya

Source: Genome medicine. 12(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100164051395.0x000001&indx=1&recIds=ETOCvdc_100164051395.0x000001

The pan-cancer landscape of prognostic germline variants in 10,582 patients.

Authors: Chatrath, Ajay¹ (AUTHOR), Przanowska, Roza¹ (AUTHOR), Kiran, Shashi¹ (AUTHOR), Su, Zhangli¹ (AUTHOR), Saha, Shekhar¹ (AUTHOR), Wilson, Briana¹ (AUTHOR), Tsunematsu, Takaaki¹ (AUTHOR), Ahn, Ji-Hye¹ (AUTHOR), Lee, Kyung Yong¹ (AUTHOR), Paulsen, Teressa¹ (AUTHOR), Sobierajska, Ewelina¹ (AUTHOR), Kiran, Manjari² (AUTHOR), Tang, Xiwei³ (AUTHOR), Li, Tianxi³ (AUTHOR), Kumar, Pankaj¹ (AUTHOR), Ratan, Aakrosh⁴ (AUTHOR), Dutta, Anindya¹ (AUTHOR) ad8q@virginia.edu

Source: Genome Medicine. 2/17/2020, Vol. 12 Issue 1, p1-18. 18p.

Subject Terms: *PHARMACOGENOMICS, *TUMOR suppressor genes, *CANCER genes, *PROTEIN structure, *CANCER, *GENE expression, *GERM cells

Impact of histopathological classification of non-functioning adenomas on long term outcomes: comparison of the 2004 and 2017 WHO classifications.

Authors: Chatrath, Ajay, Kosyakovsky, Jacob, Patel, Parantap, Ahn, Jungeun, Elsarrag, Mazin, Young, Lena C., Wu, Angela, Sokolowski, Jennifer D., Taylor, Davis, Jane Jr., John A., Lopes, M. Beatriz S.

Source: Pituitary; Dec2022, Vol. 25 Issue 6, p988-996, 9p