Fetal γ-globin genes are regulated by the BGLT3 long noncoding RNA locus

Authors: Ivaldi, Maria Soledad, Diaz, Luis Francisco, Chakalova, Lyubomira, Lee, Jongjoo, Krivega, Ivan, Dean, Ann

Source: In Blood 1 November 2018 132(18):1963-1973

An intergenic non-coding RNA promoter required for histone modifications in the human β-globin chromatin domain.

Authors: Debrand, Emmanuel¹, Chakalova, Lyubomira¹, Miles, Joanne¹, Dai, Yan-Feng¹, Goyenechea, Beatriz¹, Dye, Sandra¹, Osborne, Cameron S.¹, Horton, Alice¹, Harju-Baker, Susanna², Pink, Ryan C.³, Caley, Daniel³, Carter, David R. F.³, Peterson, Kenneth R.² kpeterson@kumc.edu, Fraser, Peter¹ pfraser@bio.fsu.edu

Source: PLoS ONE. 8/14/2019, Vol. 14 Issue 8, p1-23. 23p.

Subject Terms: *LINCRNA, *HUMAN chromatin, *NON-coding RNA, *FETAL hemoglobin, *GLOBIN genes, *EPIGENOMICS, *GENE expression, *CYTOLOGY

Tagging and recovery of elements associated with target molecules

The Corfu δβ thalassemia deletion disrupts γ-globin gene silencing and reveals post-transcriptional regulation of HbF expression

Authors: Chakalova, Lyubomira, Osborne, Cameron S., Dai, Yan-Feng, Goyenechea, Beatriz, Metaxotou-Mavromati, Anna, Kattamis, Antonios, Kattamis, Christos, Fraser, Peter ^*

Source: In Blood 1 March 2005 105(5):2154-2160

RNA Fluorescence In Situ Hybridization Tagging and Recovery of Associated Proteins to Analyze In Vivo Chromatin Interactions

Authors: Chakalova, Lyubomira, Carter, David, Fraser, Peter

Source: In Methods in Enzymology 2003 375:479-493

Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells.

Authors: Schoenfelder, Stefan, Sexton, Tom, Chakalova, Lyubomira

Source: Nature Genetics; January 2010, Vol. 42 Issue 1, p53-61, 9p

Myc Dynamically and Preferentially Relocates to a Transcription Factory Occupied by Igh.

Authors: Osborne, Cameron S.¹ cameron.osborne@bbsrc.ac.uk, Chakalova, Lyubomira¹, Mitchell, Jennifer A.¹, Horton, Alice¹, Wood, Andrew L.¹, Bolland, Daniel J.¹, Corcoran, Anne E.¹, Fraser, Peter¹

Source: PLoS Biology. Aug2007, Vol. 5 Issue 8, p1763-1772. 10p. 1 Color Photograph, 2 Charts, 6 Graphs.

Subject Terms: *RNA polymerases, *TRANSFERASES, *GENES, *CELL nuclei, *LYMPHOMAS, *FLUORESCENCE in situ hybridization

Replication and transcription: Shaping the landscape of the genome.

Authors: Chakalova, Lyubomira¹, Debrand, Emmanuel¹, Mitchell, Jennifer A.¹, Osborne, Cameron S.¹, Fraser, Peter² peter.fraser@bbsrc.ac.uk

Source: Nature Reviews Genetics. Sep2005, Vol. 6 Issue 9, p669-678. 10p. 2 Color Photographs, 3 Diagrams.

Subject Terms: *DNA replication, *DNA synthesis, *CHROMOSOME replication, *GENOMES, *GENETICS

Active genes dynamically colocalize to shared sites of ongoing transcription.

Authors: Osborne, Cameron S.¹, Chakalova, Lyubomira¹, Brown, Karen E.², Carter, David¹, Horton, Alice¹, Debrand, Emmanuel¹, Goyenechea, Beatriz¹, Mitchell, Jennifer A.¹, Lopes, Susana³, Reik, Wolf³, Fraser, Peter¹

Source: Nature Genetics. Oct2004, Vol. 36 Issue 10, p1065-1071. 7p.

Subject Terms: *GENE expression, *RNA polymerases, *GENETIC regulation, *TRANSCRIPTION factors, *RNA, *GENES

Long-range chromatin regulatory interactions in vivo.

Authors: Carter, David, Chakalova, Lyubomira, Osborne, Cameron S., Dai, Yan-feng, Fraser, Peter

Source: Nature Genetics. Dec2002, Vol. 32 Issue 4, p623. 4p.

Subject Terms: *CHROMATIN, *GENES

Brushed Aside and Silenced

Authors: Chakalova, Lyubomira, Fraser, Peter

Source: In Developmental Cell 15 April 2008 14(4):461-462

Transcriptionally active and inactive mouse β-globin gene loci are repaired at similar rates after ultraviolet irradiation.

Authors: Chakalova, Lyubomira, Russev, George

Source: European Journal of Biochemistry. May99 Part 1, Vol. 261 Issue 3, p667. 7p. 1 Diagram, 1 Chart, 4 Graphs.

Subject Terms: *ULTRAVIOLET radiation, *DNA repair, *CENTRIFUGATION, *SCIENTIFIC experimentation

Fetal γ-globin genes are regulated by the BGLT3long noncoding RNA locus

Authors: Ivaldi, Maria Soledad, Diaz, Luis Francisco, Chakalova, Lyubomira, Lee, Jongjoo, Krivega, Ivan, Dean, Ann

Source: Blood; November 2018, Vol. 132 Issue: 18 p1963-1973, 11p

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