Analytical sensitivity and efficiency comparisons of SARS-CoV-2 RT–qPCR primer–probe sets

Authors: Vogels, Chantal B. F., Brito, Anderson F., Wyllie, Anne L., Fauver, Joseph R., Ott, Isabel M., Kalinich, Chaney C., Petrone, Mary E., Casanovas-Massana, Arnau, Catherine Muenker, M., Moore, Adam J., Klein, Jonathan, Lu, Peiwen, Lu-Culligan, Alice, Jiang, Xiaodong, Kim, Daniel J., Kudo, Eriko, Mao, Tianyang, Moriyama, Miyu, Oh, Ji Eun, Park, Annsea, Silva, Julio, Song, Eric, Takahashi, Takehiro, Taura, Manabu, Tokuyama, Maria, Venkataraman, Arvind, Weizman, Orr-El, Wong, Patrick, Yang, Yexin, Cheemarla, Nagarjuna R., White, Elizabeth B., Lapidus, Sarah, Earnest, Rebecca, Geng, Bertie, Vijayakumar, Pavithra, Odio, Camila, Fournier, John, Bermejo, Santos, Farhadian, Shelli, Dela Cruz, Charles S., Iwasaki, Akiko, Ko, Albert I., Landry, Marie L., Foxman, Ellen F., Grubaugh, Nathan D.

Source: Nature microbiology. 5(10):1299-1305

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100174419988.0x000001&indx=1&recIds=ETOCvdc_100174419988.0x000001

De novo emergence of a remdesivir resistance mutation during treatment of persistent SARS-CoV-2 infection in an immunocompromised patient: a case report.

Authors: Gandhi, Shiv, Klein, Jonathan, Robertson, Alexander J., Peña-Hernández, Mario A., Lin, Michelle J., Roychoudhury, Pavitra, Lu, Peiwen, Fournier, John, Ferguson, David, Mohamed Bakhash, Shah A. K., Catherine Muenker, M., Srivathsan, Ariktha, Wunder Jr, Elsio A., Kerantzas, Nicholas, Wang, Wenshuai, Lindenbach, Brett, Pyle, Anna, Wilen, Craig B., Ogbuagu, Onyema, Greninger, Alexander L.

Source: Nature Communications; 3/17/2022, Vol. 13 Issue 1, p1-8, 8p

Subject Terms: IMMUNOCOMPROMISED patients, REMDESIVIR, RNA replicase, SARS-CoV-2, WHOLE genome sequencing

High-resolution epitope mapping and characterization of SARS-CoV-2 antibodies in large cohorts of subjects with COVID-19.

Authors: Haynes, Winston A., Kamath, Kathy, Bozekowski, Joel, Baum-Jones, Elisabeth, Campbell, Melissa, Casanovas-Massana, Arnau, Daugherty, Patrick S., Dela Cruz, Charles S., Dhal, Abhilash, Farhadian, Shelli F., Fitzgibbons, Lynn, Fournier, John, Jhatro, Michael, Jordan, Gregory, Klein, Jon, Lucas, Carolina, Kessler, Debra, Luchsinger, Larry L., Martinez, Brian, Catherine Muenker, M.

Source: Communications Biology; 11/22/2021, Vol. 4 Issue 1, p1-14, 14p

Subject Terms: SARS-CoV-2, COVID-19, HUMORAL immunity, VACCINE effectiveness, AMINO acid sequence