Gut microbiome composition changes in obstructive sleep apnoea syndrome also in relation to excessive daytime sleepiness

Authors: Fernandes, Mariana ^{a, 1}, Palmieri, Orazio ^{b, 1}, Castellana, Stefano ^{c, 1}, Spanetta, Matteo ^a, Latiano, Tiziana ^b, Lupo, Clementina ^a, De Masi, Claudia ^d, Cardile, Christian ^a, Calvello, Carmen ^a, Izzi, Francesca ^d, Placidi, Fabio ^{a, d}, Mazza, Tommaso ^c, Mercuri, Nicola Biagio ^{a, d}, Latiano, Anna ^{b, 2}, Liguori, Claudio ^{a, d, ⁎, 2, 3}

Source: In Brain Research Bulletin March 2025 222

Detection of ALK fusion variants by RNA-based NGS and clinical outcome correlation in NSCLC patients treated with ALK-TKI sequences

Authors: Tabbò, Fabrizio, Muscarella, Lucia Anna, Gobbini, Elisa, Trombetta, Domenico, Castellana, Stefano, Rigutto, Angelica, Galetta, Domenico, Maiello, Evaristo, Martelli, Olga, Tiseo, Marcello, Scotti, Vieri, Ghilardi, Laura, Gregorc, Vanesa, Sergi, Concetta, Pilotto, Sara, Del Conte, Alessandro, Cappuzzo, Federico, Cortinovis, Diego, Osman, Giorgia, Bareggi, Claudia, Di Maio, Massimo, Rossi, Antonio, Rossi, Giulio, Bria, Emilio, Volante, Marco, Scagliotti, Giorgio Vittorio, Graziano, Paolo, Novello, Silvia, Righi, Luisella

Source: In European Journal of Cancer October 2022 174:200-211

Healthy and pro-inflammatory gut ecology plays a crucial role in the digestion and tolerance of a novel Gluten Friendly™ bread in celiac subjects: a randomized, double blind, placebo control in vivo studyElectronic supplementary information (ESI) available. See DOI: 10.1039/d1fo00490e

Authors: Andriulli, Angelo, Bevilacqua, Antonio, Palmieri, Orazio, Latiano, Anna, Fontana, Rosanna, Gioffreda, Domenica, Castellana, Stefano, Mazza, Tommaso, Panza, Anna, Menzaghi, Claudia, Grandone, Elvira, di Mauro, Lazzaro, Decina, Ivana, Tricarico, Michele, Musaico, Daniela, Mäki, Markku, Isola, Jorma, Popp, Alina, Taavela, Juha, Petruzzi, Leonardo, Sinigaglia, Milena, Rosaria Corbo, Maria, Lamacchia, Carmela

Source: Food & function. 13(3):1299-1315

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100140078538.0x000001&indx=1&recIds=ETOCvdc_100140078538.0x000001

KDM6A missense variants hamper H3 histone demethylation in lung squamous cell carcinoma

Authors: Biagini, Tommaso, Petrizzelli, Francesco, Bianco, Salvatore Daniele, Liorni, Niccolò, Napoli, Alessandro, Castellana, Stefano, Luigi Vescovi, Angelo, Carella, Massimo, Caputo, Viviana, Mazza, Tommaso

Source: Computational and Structural Biotechnology Journal. 20:3151-3160

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100190063038.0x000001&indx=1&recIds=ETOCvdc_100190063038.0x000001

Germline Alterations in Patients With IBD-associated Colorectal Cancer

Authors: Biscaglia, Giuseppe, Latiano, Anna, Castellana, Stefano, Fontana, Rosanna, Gentile, Annamaria, Latiano, Tiziana, Corritore, Giuseppe, Panza, Anna, Nardella, Marianna, Martino, Giuseppina, Bossa, Fabrizio, Perri, Francesco, Mazza, Tommaso, Andriulli, Angelo, Palmieri, Orazio

Source: Inflammatory bowel diseases. 28(3):447-454

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100161613404.0x000001&indx=1&recIds=ETOCvdc_100161613404.0x000001

Lactobacillus rhamnosus Sepsis in a Preterm Infant Following Probiotic Administration: Challenges in Diagnosis.

Authors: Farella, Ilaria, Fortunato, Maria, Martinelli, Domenico, De Carlo, Carmela, Sparapano, Eleonora, Stolfa, Stefania, Romanelli, Federica, De Laurentiis, Vittoriana, Martinotti, Stefano, Capozzi, Loredana, Castellana, Stefano, Parisi, Antonio, Latorre, Giuseppe

Source: Microorganisms; Feb2025, Vol. 13 Issue 2, p265, 9p

Subject Terms: NEONATAL intensive care units, WHOLE genome sequencing, LACTOBACILLUS rhamnosus, PREMATURE infants, NEONATAL sepsis

Isolation and Characterization of Colistin-Resistant Enterobacteriaceae from Foods in Two Italian Regions in the South of Italy.

Authors: Fraccalvieri, Rosa, Bianco, Angelica, Difato, Laura Maria, Capozzi, Loredana, Del Sambro, Laura, Castellana, Stefano, Donatiello, Adelia, Serrecchia, Luigina, Pace, Lorenzo, Farina, Donatella, Galante, Domenico, Caruso, Marta, Tempesta, Maria, Parisi, Antonio

Source: Microorganisms; Jan2025, Vol. 13 Issue 1, p163, 17p

Subject Terms: ESCHERICHIA coli, MICROBIAL sensitivity tests, MULTIDRUG resistance, DRUG resistance in microorganisms, FOOD pathogens

Review of clinical and molecular variability in autosomal recessive cutis laxa 2A

Authors: Morlino, Silvia, Nardella, Grazia, Castellana, Stefano, Micale, Lucia, Copetti, Massimiliano, Fusco, Carmela, Castori, Marco

Source: American journal of medical genetics.Part A. 185(3):955-965

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100114532099.0x000001&indx=1&recIds=ETOCvdc_100114532099.0x000001

Mechanisms of pathogenesis of missense mutations on the KDM6A-H3 interaction in type 2 Kabuki Syndrome

Authors: Petrizzelli, Francesco, Biagini, Tommaso, Barbieri, Alessandro, Parca, Luca, Panzironi, Noemi, Castellana, Stefano, Caputo, Viviana, Vescovi, Angelo Luigi, Carella, Massimo, Mazza, Tommaso

Source: In Computational and Structural Biotechnology Journal 2020 18:2033-2042

Antimicrobial and Phylogenomic Characterization of Bacillus cereus Group Strains Isolated from Different Food Sources in Italy.

Authors: Farina, Donatella, Bianco, Angelica, Manzulli, Viviana, Castellana, Stefano, Parisi, Antonio, Caruso, Marta, Fraccalvieri, Rosa, Serrecchia, Luigina, Rondinone, Valeria, Pace, Lorenzo, Fasanella, Antonio, Vetritto, Valerio, Difato, Laura Maria, Cipolletta, Dora, Iatarola, Michela, Galante, Domenico

Source: Antibiotics (2079-6382); Sep2024, Vol. 13 Issue 9, p898, 13p

Subject Terms: BACILLUS cereus, WHOLE genome sequencing, DRUG resistance in bacteria, FOOD poisoning, DRUG resistance in microorganisms

Deciphering Microbial Composition in Patients with Inflammatory Bowel Disease: Implications for Therapeutic Response to Biologic Agents.

Authors: Palmieri, Orazio, Bossa, Fabrizio, Castellana, Stefano, Latiano, Tiziana, Carparelli, Sonia, Martino, Giuseppina, Mangoni, Manuel, Corritore, Giuseppe, Nardella, Marianna, Guerra, Maria, Biscaglia, Giuseppe, Perri, Francesco, Mazza, Tommaso, Latiano, Anna

Source: Microorganisms; Jul2024, Vol. 12 Issue 7, p1260, 17p

Subject Terms: INFLAMMATORY bowel diseases, CROHN'S disease, SHORT-chain fatty acids, ULCERATIVE colitis, GUT microbiome

Clinical and Molecular Traits of a Novel SPECC1L-ALK Fusion in a Patient with Advanced Non-Small Cell Lung Cancer.

Authors: Centonza, Antonella, Mazza, Tommaso, Trombetta, Domenico, Sparaneo, Angelo, Petrizzelli, Francesco, Castellana, Stefano, Centra, Flavia, Fabrizio, Federico Pio, Di Micco, Concetta Martina, Benso, Federica, Tabbò, Fabrizio, Righi, Luisella, Merlini, Alessandra, Graziano, Paolo, Muscarella, Lucia Anna

Source: Journal of Personalized Medicine; Jul2024, Vol. 14 Issue 7, p670, 9p

Subject Terms: NON-small-cell lung carcinoma, ANAPLASTIC lymphoma kinase, CHIMERIC proteins, GENE fusion, NUCLEOTIDE sequencing

TRIM8-driven transcriptomic profile of neural stem cells identified glioma-related nodal genes and pathways

Authors: Venuto, Santina, Castellana, Stefano, Monti, Maria, Appolloni, Irene, Fusilli, Caterina, Fusco, Carmela, Pucci, Piero, Malatesta, Paolo, Mazza, Tommaso, Merla, Giuseppe, Micale, Lucia

Source: In BBA - General Subjects February 2019 1863(2):491-501

Pannonibacter anstelovis sp. nov. Isolated from Two Cases of Bloodstream Infections in Paediatric Patients.

Authors: Castellana, Stefano, De Laurentiis, Vittoriana, Bianco, Angelica, Del Sambro, Laura, Grassi, Massimo, De Leonardis, Francesco, Derobertis, Anna Maria, De Carlo, Carmen, Sparapano, Eleonora, Mosca, Adriana, Stolfa, Stefania, Ronga, Luigi, Santacroce, Luigi, Chironna, Maria, Parisi, Michela, Capozzi, Loredana, Parisi, Antonio

Source: Microorganisms; Apr2024, Vol. 12 Issue 4, p799, 17p

Subject Terms: CHILD patients, NUCLEIC acid hybridization, WHOLE genome sequencing, NOSOCOMIAL infections, GENOMICS

Geographic Terms: BARI (Italy)

Molecular dynamics recipes for genome research

Authors: Biagini, Tommaso, Chillemi, Giovanni, Mazzoccoli, Gianluigi, Grottesi, Alessandro, Fusilli, Caterina, Capocefalo, Daniele, Castellana, Stefano, Vescovi, Angelo Luigi, Mazza, Tommaso

Source: Briefings in bioinformatics. 19(5):853-862

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN620629593&indx=1&recIds=ETOCRN620629593

Sudden cardiac death in J wave syndrome with short QT associated to a novel mutation in Nav 1.8 coding gene SCN10A: First case report for a possible pharmacogenomic role

Authors: Di Stolfo, Giuseppe, Palumbo, Pietro, Castellana, Stefano, Mastroianno, Sandra, Biagini, Tommaso, Palumbo, Orazio, Leone, Maria Pia, De Luca, Giovanni, Potenza, Domenico Rosario, Mazza, Tommaso, Russo, Aldo A., Carella, Massimo

Source: Journal of electrocardiology. 51(5):809-813

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100066711124.0x000001&indx=1&recIds=ETOCvdc_100066711124.0x000001

A novel mutation in CDH11, encoding cadherin‐11, cause Branchioskeletogenital (Elsahy‐Waters) syndrome

Authors: Castori, Marco, Ott, Claus‐Eric, Bisceglia, Luigi, Leone, Maria Pia, Mazza, Tommaso, Castellana, Stefano, Tomassi, Jurgen, Lanciotti, Silvia, Mundlos, Stefan, Hennekam, Raoul C., Kornak, Uwe, Brancati, Francesco

Source: American journal of medical genetics.Part A. 176(9):2028-2033

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100083917760.0x000001&indx=1&recIds=ETOCvdc_100083917760.0x000001

comparative benchmark of classic DNA motif discovery tools on synthetic data.

Authors: Castellana, Stefano¹ (AUTHOR), Biagini, Tommaso¹ (AUTHOR), Parca, Luca¹ (AUTHOR), Petrizzelli, Francesco^1,2 (AUTHOR), Bianco, Salvatore Daniele¹ (AUTHOR), Vescovi, Angelo Luigi³ (AUTHOR), Carella, Massimo⁴ (AUTHOR), Mazza, Tommaso¹ (AUTHOR) t.mazza@css-mendel.it

Source: Briefings in Bioinformatics. Nov2021, Vol. 22 Issue 6, p1-13. 13p.

Subject Terms: *MOLECULAR biology, *DNA, *DNA sequencing, *COMPUTATIONAL biology, *BIOINFORMATICS

Putative TMPRSS3/GJB2 digenic inheritance of hearing loss detected by targeted resequencing

Authors: Leone, Maria Pia, Palumbo, Pietro, Ortore, Rocco, Castellana, Stefano, Palumbo, Orazio, Melchionda, Salvatore, Palladino, Teresa, Stallone, Raffaella, Mazza, Tommaso, Cocchi, Roberto, Carella, Massimo

Source: Molecular and cellular probes. 33:24-27

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100045276331.0x000001&indx=1&recIds=ETOCvdc_100045276331.0x000001

A Broad Overview of Computational Methods for Predicting the Pathophysiological Effects of Non-synonymous Variants

Authors: Castellana, Stefano, Fusilli, Caterina, Mazza, Tommaso

Source: Methods in molecular biology. 1415:423-440

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN606174390&indx=1&recIds=ETOCRN606174390