A High-Quality Genome Assembly for Aureobasidium pullulans CG163, the Active Ingredient in Aureo Gold, a Bio-Bactericide Registered for Control of Bacterial Canker of Kiwifruit Caused by Pseudomonas syringae pv. actinidiae Biovar 3

Authors: Huub de Jong, Saadiah Arshed, Janet Yu, Deirdre Cornish, Joel L. Vanneste, Tony Reglinski, Philip A. G. Elmer, Matthew D. Templeton

Source: PhytoFrontiers, Vol 4, Iss 4, Pp 486-490 (2024)

Subject Terms: biocontrol, carbohydrate-active enzymes, long-read assembly, peptidases, Pseudomonas syringae pv. actinidiae, secondary metabolites, Plant culture, SB1-1110, Botany, QK1-989

File Description: electronic resource

Relation: https://doaj.org/toc/2690-5442

Access URL: https://doaj.org/article/b45798527b824044abf19d0f941fa4dc

Discovery of a novel marine Bacteroidetes with a rich repertoire of carbohydrate-active enzymes

Authors: Beihan Chen, Guohua Liu, Quanrui Chen, Huanyu Wang, Le Liu, Kai Tang

Source: Computational and Structural Biotechnology Journal, Vol 23, Iss , Pp 406-416 (2024)

Subject Terms: Bacteroidetes, Polysaccharide metabolism, Carbohydrate-active enzymes, Type IX secretion system, Comparative genomic analysis, Biotechnology, TP248.13-248.65

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2001037023005007; https://doaj.org/toc/2001-0370

Access URL: https://doaj.org/article/57be2992229e40faab58e623f69e3313

Comparison of microbial diversity and carbohydrate-active enzymes in the hindgut of two wood-feeding termites, Globitermes sulphureus (Blattaria: Termitidae) and Coptotermes formosanus (Blattaria: Rhinotermitidae)

Authors: Zhidong Zhang, Kai Wang, Chuanshan Zou, Ting Zhao, Wenbin Wu, Cai Wang, Yan Hua

Source: BMC Microbiology, Vol 24, Iss 1, Pp 1-16 (2024)

Subject Terms: Lignocellulose, Termite, Hindgut microbiota, Metagenomic sequencing, 16S rRNA sequencing, Carbohydrate-active enzymes (CAZymes), Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2180

Access URL: https://doaj.org/article/63eea75715e34b39877e1fd540219c59

Biogeographic patterns and adaptive strategies of microbial carbon metabolic profiles in paddy soils in the Chinese Mollisol region

Authors: Xiaojing Hu, Haidong Gu, Mikhail Semenov, Yongbin Wang, Jinyuan Zhang, Zhenhua Yu, Yansheng Li, Junjie Liu, Jian Jin, Xiaobing Liu, Guanghua Wang

Source: Geoderma, Vol 456, Iss , Pp 117265- (2025)

Subject Terms: Microbial biogeography, Carbon cycling pathways, Carbohydrate-active enzymes, Metagenome-assembled genomes, Viral genome, Science

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S001670612500103X; https://doaj.org/toc/1872-6259

Access URL: https://doaj.org/article/30651af49b1c4d31a8168baa075983a6

Polysaccharide metabolic pattern of Cytophagales and Flavobacteriales: a comprehensive genomics approach

Authors: Kuo-Jian Ma, Yong-Lian Ye, Yu-Kang Li, Ge-Yi Fu, Yue-Hong Wu, Cong Sun, Xue-Wei Xu

Source: Frontiers in Marine Science, Vol 12 (2025)

Subject Terms: Flavobacteriales, Cytophagales, carbohydrate-active enzymes, polysaccharide metabolism, comprehensive genomic analysis, Science, General. Including nature conservation, geographical distribution, QH1-199.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmars.2025.1551618/full; https://doaj.org/toc/2296-7745

Access URL: https://doaj.org/article/0ffa025a926c4033b895222b10462acb

Acetylxylan esterase is the key to the host specialization of wood-decay fungi predicted by random forest machine-learning algorithm

Authors: Natsuki Hasegawa, Masashi Sugiyama, Kiyohiko Igarashi

Source: Journal of Wood Science, Vol 70, Iss 1, Pp 1-10 (2024)

Subject Terms: Acetylxylan esterase, Wood-decay fungi, Carbohydrate-Active enZymes, Machine learning, Random forest algorithm, Forestry, SD1-669.5, Building construction, TH1-9745

File Description: electronic resource

Relation: https://doaj.org/toc/1611-4663

Access URL: https://doaj.org/article/69877b15cf4b44ffa798958a8036c4f0

Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history

Authors: Lisa Mazéas, Ahlem Bouguerba-Collin, J. Mark Cock, France Denoeud, Olivier Godfroy, Loraine Brillet-Guéguen, Tristan Barbeyron, Agnieszka P. Lipinska, Ludovic Delage, Erwan Corre, Elodie Drula, Bernard Henrissat, Mirjam Czjzek, Nicolas Terrapon, Cécile Hervé

Source: BMC Genomics, Vol 25, Iss 1, Pp 1-19 (2024)

Subject Terms: Extracellular matrix, Brown algae, Carbohydrate-active enzymes, Alginates, Fucans, Glycosyltransferases, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/64060c8268594719b10c3907310a05c5

Comparative genomic analysis revealed that dietary habits affected the adaptation of Bifidobacterium bifidum to the intestinal tract in different geographic populations

Authors: Min Li, Jie Yu, Weicheng Li, Qiong Wu, Jiaqi Sun, Zhihong Sun

Source: Food Science and Human Wellness, Vol 13, Iss 5, Pp 3006-3017 (2024)

Subject Terms: bifidobacterium bifidum, comparative genomics, genetic diversity, adaptation, carbohydrate-active enzymes, Nutrition. Foods and food supply, TX341-641

File Description: electronic resource

Relation: https://www.sciopen.com/article/10.26599/FSHW.2022.9250243; https://doaj.org/toc/2097-0765; https://doaj.org/toc/2213-4530

Access URL: https://doaj.org/article/cee3d19db0b343f097ac7cfeb7645e9e

A scalable, chromatography-free, biocatalytic method to produce the xyloglucan heptasaccharide XXXG

Authors: Andrew M. Rodd, William M. Mawhinney, Harry Brumer

Source: Biotechnology for Biofuels and Bioproducts, Vol 17, Iss 1, Pp 1-13 (2024)

Subject Terms: Tamarind kernel powder, Carbohydrate-active enzymes, Xyloglucanase, Yeast, Galactose fermentation, Biotechnology, TP248.13-248.65, Fuel, TP315-360

File Description: electronic resource

Relation: https://doaj.org/toc/2731-3654

Access URL: https://doaj.org/article/f6b1985a26d641f3a73f11b609dc1576

Metagenomic analysis reveals the community composition and functional characteristics of ruminal microbes in fermenting lignocellulosic biomass in vivo and in vitro

Authors: Liang, Jinsong ^a, Lv, Longyi ^a, Sun, Li ^a, Chen, Le ^b, Zhang, Guangming ^{a, ⁎}, Zhang, Panyue ^{c, ⁎}

Source: In Journal of Environmental Chemical Engineering April 2025 13(2)

Facilitating the enzymatic hydrolysis of polysaccharides by carbohydrate active enzymes and enhanced humification process with microbial consortium revealed by metagenomics analysis during cow manure-straw composting

Authors: Qin, Xiaoya, Bao, Rixin, Huang, Wenyu, Li, Qunliang ^⁎

Source: In Journal of Environmental Chemical Engineering April 2025 13(2)

Correlation between the structures of natural polysaccharides and their properties in regulating gut microbiota: Current understanding and beyond

Authors: Keung, Wing-Shan ¹, Zhang, Wei-Hao ¹, Luo, Han-Yan, Chan, Kam-Chun, Chan, Yui-Man, Xu, Jun ^⁎

Source: In Carbohydrate Polymers 15 March 2025 352

Bridging dietary polysaccharides and gut microbiome: How to achieve precision modulation for gut health promotion

Authors: Sun, Xihao ^{a, b}, Pei, Zhangming ^{a, b}, Wang, Hongchao ^{a, b}, Zhao, Jianxin ^{a, b}, Chen, Wei ^{a, b, c}, Lu, Wenwei ^{a, b, c, ⁎}

Source: In Microbiological Research March 2025 292

Membrane Vesicles Can Contribute to Cellulose Degradation by Teredinibacter turnerae, a Cultivable Intracellular Endosymbiont of Shipworms

Authors: Mark T. Gasser, Annie Liu, Marvin A. Altamia, Bryan R. Brensinger, Sarah L. Brewer, Ron Flatau, Eric R. Hancock, Sarah P. Preheim, Claire Marie Filone, Daniel L. Distel

Source: Microbial Biotechnology, Vol 17, Iss 12, Pp n/a-n/a (2024)

Subject Terms: carbohydrate‐active enzymes, CAZymes, lignocellulose degradation, OMVs, outer membrane vesicles, symbiosis, Biotechnology, TP248.13-248.65

File Description: electronic resource

Relation: https://doaj.org/toc/1751-7915

Access URL: https://doaj.org/article/4e54a83dc9f245c0b0ff1acd8395bd6a

Differences in Gut Microbial Composition and Characteristics Among Three Populations of the Bamboo Pitviper (Viridovipera stejnegeri)

Authors: Jiaqi Zhang, Songwen Tan, Bing Lyu, Min Yu, Yue Lan, Ruixiang Tang, Zhenxin Fan, Peng Guo, Lei Shi

Source: Ecology and Evolution, Vol 14, Iss 12, Pp n/a-n/a (2024)

Subject Terms: carbohydrate‐active enzymes, gut microbiota, metagenomic next‐generation sequencing, microbial diversity, Viridovipera stejnegeri, Ecology, QH540-549.5

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7758

Access URL: https://doaj.org/article/fd77855f1e7f4d158a33a4a8755ecb76

Evolution of gut microbiota in psoriatic arthritis treated with IL-17 inhibitor revealed by metagenomics

Authors: Liu, Wei ^a, Geng, Yan ^a, Wang, Yu ^a, Zhao, Juan ^a, Fan, Yong ^a, Zhang, Xiaohui ^a, Xie, Wenhui ^a, Zhang, Liang ^b, Zhang, Zhuoli ^{a, *}

Source: In Joint Bone Spine July 2025 92(4)

Comparative genomic analysis of Planctomycetota potential for polysaccharide degradation identifies biotechnologically relevant microbes

Authors: Dominika Klimek, Malte Herold, Magdalena Calusinska

Source: BMC Genomics, Vol 25, Iss 1, Pp 1-16 (2024)

Subject Terms: Planctomycetota, Carbohydrate-active enzymes (CAZymes), Carbohydrolytic potential, Algal and lignocellulosic biomass degradation, Bioprospecting, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/d09d4ef8751e4f7aaaf858feff95dbf0

CAZyme3D: A Database of 3D Structures for Carbohydrate-active Enzymes

Authors: Siva Shanmugam, N.R., Yin, Yanbin ^⁎

Source: In Journal of Molecular Biology February 2025

Important ecophysiological roles of Nocardiopsis in lignocellulose degradation during aerobic compost with humic acid addition

Authors: Wang, Zhaoxuan ^a, Yin, Bo ^b, Ao, Guoxu ^a, Yang, Liguo ^c, Ma, Yue ^c, Shi, Yueqi ^a, Sun, Shanshan ^{a, ⁎}, Ling, Hongzhi ^{a, ⁎⁎}

Source: In Journal of Environmental Management January 2025 373

Genomic and phenotypic characterization of Weissella paramesenteroides WP12 from fermented fish sauce (Budu) reveals promising strain for food fermentation and probiotic applications

Authors: Chaichana, Nattarika ^{a, b}, Boonsan, Jirasa ^a, Singkhamanan, Kamonnut ^a, Wonglapsuwan, Monwadee ^b, Pomwised, Rattanaruji ^b, Yaikhan, Thunchanok ^a, Thant, Ei Phway ^a, Surachat, Komwit ^{a, c, ⁎}

Source: In LWT 1 January 2025 215