Stroma-infiltrating T cell spatiotypes define immunotherapy outcomes in adolescent and young adult patients with melanoma

Authors: Xinyu Bai, Grace H. Attrill, Tuba N. Gide, Peter M. Ferguson, Kazi J. Nahar, Ping Shang, Ismael A. Vergara, Umaimainthan Palendira, Ines Pires da Silva, Matteo S. Carlino, Alexander M. Menzies, Georgina V. Long, Richard A. Scolyer, James S. Wilmott, Camelia Quek

Source: Nature Communications, Vol 15, Iss 1, Pp 1-13 (2024)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/4e3968539ed44b5d8e921475912375ae

Naegleria fowleri: Portrait of a Cerebral Killer

Authors: Nguyen The Nguyen Phung, Huong Thien Pham, Thuc Thanh Tran, Vu Hoang Dinh, Nhut Minh Tran, Nuong Ai Nguyen Tran, Minh Quang Ngoc Ngo, Huong Thanh Thi Nguyen, Duy Khanh Tran, Thao Kieu Thi Le, Camelia Quek, Van Hung Pham, Son Truong Pham

Source: Diagnostics, Vol 15, Iss 1, p 89 (2025)

Subject Terms: primary amebic meningoencephalitis, multiplex real-time PCR, pediatric infectious diseases, Medicine (General), R5-920

File Description: electronic resource

Relation: https://www.mdpi.com/2075-4418/15/1/89; https://doaj.org/toc/2075-4418

Access URL: https://doaj.org/article/cf681c8d601a479bad8b392a51267961

Cross-platform comparison of immune signatures in immunotherapy-treated patients with advanced melanoma using a rank-based scoring approach

Authors: Yizhe Mao, Tuba N. Gide, Nurudeen A. Adegoke, Camelia Quek, Nigel Maher, Alison Potter, Ellis Patrick, Robyn P. M. Saw, John F. Thompson, Andrew J. Spillane, Kerwin F. Shannon, Matteo S. Carlino, Serigne N. Lo, Alexander M. Menzies, Inês Pires da Silva, Georgina V. Long, Richard A. Scolyer, James S. Wilmott

Source: Journal of Translational Medicine, Vol 21, Iss 1, Pp 1-16 (2023)

Subject Terms: Advanced melanoma, Immunotherapy, Immune signature, Gene expression profile, Single-sample signature score, Cross-platform analyses, Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/1479-5876

Access URL: https://doaj.org/article/ef7110af153c44aabefb4fbcf176e3ad

Classification of the tumor immune microenvironment and associations with outcomes in patients with metastatic melanoma treated with immunotherapies

Authors: Ines Pires da Silva, Richard A Scolyer, Georgina Long, Matteo S Carlino, Ismael A Vergara, James S Wilmott, Serigne N Lo, Tuba N Gide, Alexander Maxwell Menzies, Nurudeen A Adegoke, Yizhe Mao, Camelia Quek, Ellis Patrick

Source: Journal for ImmunoTherapy of Cancer, Vol 11, Iss 10 (2023)

Subject Terms: Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://jitc.bmj.com/content/11/10/e007144.full; https://doaj.org/toc/2051-1426

Access URL: https://doaj.org/article/6850a655f74044878275417fb41be554

Distinct pretreatment innate immune landscape and posttreatment T cell responses underlie immunotherapy-induced colitis

Authors: Kazi J. Nahar, Felix Marsh-Wakefield, Robert V. Rawson, Tuba N. Gide, Angela L. Ferguson, Ruth Allen, Camelia Quek, Ines Pires da Silva, Stephen Tattersal, Christopher J. Kiely, Neomal Sandanayake, Matteo S. Carlino, Geoff McCaughan, James S. Wilmott, Richard A. Scolyer, Georgina V. Long, Alexander M. Menzies, Umaimainthan Palendira

Source: JCI Insight, Vol 7, Iss 21 (2022)

Subject Terms: Immunology, Oncology, Medicine

File Description: electronic resource

Relation: https://doaj.org/toc/2379-3708

Access URL: https://doaj.org/article/3735f33fbccb4897a34d7c5e7b464466

Cryopreservation of human cancers conserves tumour heterogeneity for single-cell multi-omics analysis

Authors: Sunny Z. Wu, Daniel L. Roden, Ghamdan Al-Eryani, Nenad Bartonicek, Kate Harvey, Aurélie S. Cazet, Chia-Ling Chan, Simon Junankar, Mun N. Hui, Ewan A. Millar, Julia Beretov, Lisa Horvath, Anthony M. Joshua, Phillip Stricker, James S. Wilmott, Camelia Quek, Georgina V. Long, Richard A. Scolyer, Bertrand Z. Yeung, Davendra Segara, Cindy Mak, Sanjay Warrier, Joseph E. Powell, Sandra O’Toole, Elgene Lim, Alexander Swarbrick

Source: Genome Medicine, Vol 13, Iss 1, Pp 1-17 (2021)

Subject Terms: Single-cell RNA sequencing, Cryopreservation, Tumour heterogeneity, CITE-Seq, Breast cancer, Prostate cancer, Medicine, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1756-994X

Access URL: https://doaj.org/article/a5ef0303cd954e8fa8a1cccb863078c6

Distribution of microRNA profiles in pre-clinical and clinical forms of murine and human prion disease

Authors: Lesley Cheng, Camelia Quek, Xia Li, Shayne A. Bellingham, Laura J. Ellett, Mitch Shambrook, Saima Zafar, Inga Zerr, Victoria A. Lawson, Andrew F. Hill

Source: Communications Biology, Vol 4, Iss 1, Pp 1-12 (2021)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/2399-3642

Access URL: https://doaj.org/article/39c8cfc317f54c2eb8c47b3a23e018f6

Validation of an Accurate Automated Multiplex Immunofluorescence Method for Immuno-Profiling Melanoma

Authors: Zarwa Yaseen, Tuba N. Gide, Jordan W. Conway, Alison J. Potter, Camelia Quek, Angela M. Hong, Georgina V. Long, Richard A. Scolyer, James S. Wilmott

Source: Frontiers in Molecular Biosciences, Vol 9 (2022)

Subject Terms: multiplex immunofluorescence, immunohistochemistry, multispectral imaging, melanoma, tumour microenvironment, pathology, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmolb.2022.810858/full; https://doaj.org/toc/2296-889X

Access URL: https://doaj.org/article/981eb8190d6b4c0d884849cb1fb0858b

Characteristics of Hepatitis B Virus Genotype and Sub-Genotype in Hepatocellular Cancer Patients in Vietnam

Authors: Phat Tan Ho, Mario Giosuè Balzanelli, Pietro Distratis, Rita Lazzaro, Duy Khanh Tran, Kieu C. D. Nguyen, Tri Minh Bui, Thinh Tien Nguyen, Son Truong Pham, Huy Song Dinh Nguyen, Vinh Thanh Tran, Toan Trong Ho, Gianna Dipalma, Francesco Inchingolo, Camelia Quek, Huong Thien Pham, Ciro Gargiulo Isacco, Luigi Santacroce, Van Hung Pham

Source: Diagnostics, Vol 12, Iss 10, p 2393 (2022)

Subject Terms: hepatitis B virus, genotype, sub-genotype, hepatocellular carcinoma, Medicine (General), R5-920

File Description: electronic resource

Relation: https://www.mdpi.com/2075-4418/12/10/2393; https://doaj.org/toc/2075-4418

Access URL: https://doaj.org/article/ffa4dab861314bef8d02d6fff9018bc5

Close proximity of immune and tumor cells underlies response to anti-PD-1 based therapies in metastatic melanoma patients

Authors: Tuba N. Gide, Ines P. Silva, Camelia Quek, Tasnia Ahmed, Alexander M. Menzies, Matteo S. Carlino, Robyn P.M. Saw, John F. Thompson, Marcel Batten, Georgina V. Long, Richard A. Scolyer, James S. Wilmott

Source: OncoImmunology, Vol 9, Iss 1 (2020)

Subject Terms: spatial distribution, multiplex immunofluorescence, tumor-infiltrating lymphocytes, melanoma, anti-pd-1, anti-ctla-4, immunotherapy, Immunologic diseases. Allergy, RC581-607, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2162-402X

Access URL: https://doaj.org/article/908395d43615467e961ccc319c2ee102

Integrated molecular and immunophenotypic analysis of NK cells in anti-PD-1 treated metastatic melanoma patients

Authors: Hansol Lee, Camelia Quek, Ines Silva, Annie Tasker, Marcel Batten, Helen Rizos, Su Yin Lim, Tuba Nur Gide, Ping Shang, Grace H. Attrill, Jason Madore, Jarem Edwards, Matteo S. Carlino, Alexander Guminski, Robyn P.M. Saw, John F. Thompson, Peter M. Ferguson, Umaimainthan Palendira, Alexander M. Menzies, Georgina V. Long, Richard A. Scolyer, James S. Wilmott

Source: OncoImmunology, Vol 8, Iss 2 (2019)

Subject Terms: melanoma, nk cells, mhc class i, anti-pd-1 therapy, Immunologic diseases. Allergy, RC581-607, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/2162-402X

Access URL: https://doaj.org/article/99ab392d7e6b45fbb50cf5649f13f283

The Prognostic Significance of Low-Frequency Somatic Mutations in Metastatic Cutaneous Melanoma

Authors: Xiaobei Zhao, Paul Little, Alan P. Hoyle, Guillaume J. Pegna, Michele C. Hayward, Anastasia Ivanova, Joel S. Parker, David L. Marron, Matthew G. Soloway, Heejoon Jo, Ashley H. Salazar, Michael P. Papakonstantinou, Deeanna M. Bouchard, Stuart R. Jefferys, Katherine A. Hoadley, David W. Ollila, Jill S. Frank, Nancy E. Thomas, Paul B. Googe, Ashley J. Ezzell, Frances A. Collichio, Carrie B. Lee, H. Shelton Earp, Norman E. Sharpless, Willy Hugo, James S. Wilmott, Camelia Quek, Nicola Waddell, Peter A. Johansson, John F. Thompson, Nicholas K. Hayward, Graham J. Mann, Roger S. Lo, Douglas B. Johnson, Richard A. Scolyer, D. Neil Hayes, Stergios J. Moschos

Source: Frontiers in Oncology, Vol 8 (2019)

Subject Terms: The Cancer Genome Atlas Project, cutaneous melanoma, next generation sequencing, RNA sequencing, prognostic significance, UV signature, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://www.frontiersin.org/article/10.3389/fonc.2018.00584/full; https://doaj.org/toc/2234-943X

Access URL: https://doaj.org/article/560aeb678e6f4595ae72777339bfb008

iSRAP – a one-touch research tool for rapid profiling of small RNA-seq data

Authors: Camelia Quek, Chol-hee Jung, Shayne A. Bellingham, Andrew Lonie, Andrew F. Hill

Source: Journal of Extracellular Vesicles, Vol 4, Iss 0, Pp 1-10 (2015)

Subject Terms: small RNA, non-coding, exosomes, next-generation sequencing, pipeline, Cytology, QH573-671

File Description: electronic resource

Relation: http://www.journalofextracellularvesicles.net/index.php/jev/article/view/29454/pdf_40; https://doaj.org/toc/2001-3078

Access URL: https://doaj.org/article/c866859169e241ff801eacecd831c994

Antimicrobial susceptibility and clarithromycin resistance patterns of Helicobacter pylori clinical isolates in Vietnam [version 1; referees: 2 approved]

Authors: Camelia Quek, Son T. Pham, Kieu T. Tran, Binh T. Pham, Loc V. Huynh, Ngan B.L. Luu, Thao K.T. Le, Kelly Quek, Van H. Pham

Source: F1000Research, Vol 5 (2016)

Subject Terms: Antimicrobials & Drug Resistance, Gastrointestinal Infections, Medicine, Science

File Description: electronic resource

Relation: http://f1000research.com/articles/5-671/v1; https://doaj.org/toc/2046-1402

Access URL: https://doaj.org/article/f6e0c9e661514db48cb0a94bde0c2442