Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging

Authors: Hickey, John W., Neumann, Elizabeth K., Radtke, Andrea J., Camarillo, Jeannie M., Beuschel, Rebecca T., Albanese, Alexandre, McDonough, Elizabeth, Hatler, Julia, Wiblin, Anne E., Fisher, Jeremy, Croteau, Josh, Small, Eliza C., Sood, Anup, Caprioli, Richard M., Angelo, R. Michael, Nolan, Garry P., Chung, Kwanghun, Hewitt, Stephen M., Germain, Ronald N., Spraggins, Jeffrey M., Lundberg, Emma, Snyder, Michael P., Kelleher, Neil L., Saka, Sinem K.

Subject Terms: Quantitative Biology - Tissues and Organs

Access URL: http://arxiv.org/abs/2107.07953

Mapping the Proteoform Landscape of Five Human Tissues

Authors: Drown, Bryon S., Jooß, Kevin, Melani, Rafael D., Lloyd-Jones, Cameron, Camarillo, Jeannie M., Kelleher, Neil L.

Source: Journal of proteome research. 21(5):1299-1310

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN629244953&indx=1&recIds=ETOCRN629244953

Mutant EZH2 Induces a Pre-malignant Lymphoma Niche by Reprogramming the Immune Response

Authors: Béguelin, Wendy, Teater, Matt, Meydan, Cem, Hoehn, Kenneth B., Phillip, Jude M., Soshnev, Alexey A., Venturutti, Leandro, Rivas, Martín A., Calvo-Fernández, María T., Gutierrez, Johana, Camarillo, Jeannie M., Takata, Katsuyoshi, Tarte, Karin, Kelleher, Neil L., Steidl, Christian, Mason, Christopher E., Elemento, Olivier, Allis, C. David, Kleinstein, Steven H., Melnick, Ari M.

Source: In Cancer Cell 11 May 2020 37(5):655-673

The serine hydroxymethyltransferase-2 (SHMT2) initiates lymphoma development through epigenetic tumor suppressor silencing

Authors: Parsa, Sara, Ortega-Molina, Ana, Ying, Hsia-Yuan, Jiang, Man, Teater, Matt, Wang, Jiahui, Zhao, Chunying, Reznik, Ed, Pasion, Joyce P., Kuo, David, Mohan, Prathibha, Wang, Shenqiu, Camarillo, Jeannie M., Thomas, Paul M., Jain, Neeraj, Garcia-Bermudez, Javier, Cho, Byoung-kyu, Tam, Wayne, Kelleher, Neil L., Socci, Nicholas, Dogan, Ahmet, De Stanchina, Elisa, Ciriello, Giovanni, Green, Michael R., Li, Sheng, Birsoy, Kivanc, Melnick, Ari M., Wendel, Hans-Guido

Source: Nature cancer. 1(6):653-664

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100172463104.0x000001&indx=1&recIds=ETOCvdc_100172463104.0x000001

Coupling Fluorescence-Activated Cell Sorting and Targeted Analysis of Histone Modification Profiles in Primary Human Leukocytes

Authors: Camarillo, Jeannie M., Swaminathan, Suchitra, Abshiru, Nebiyu A., Sikora, Jacek W., Thomas, Paul M., Kelleher, Neil L.

Source: Journal of the American Society for Mass Spectrometry. 30(12):2526-2534

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100171995679.0x000001&indx=1&recIds=ETOCvdc_100171995679.0x000001

Proteoform‐Selective Imaging of Tissues Using Mass Spectrometry**

Authors: Yang, Manxi, Hu, Hang, Su, Pei, Thomas, Paul M., Camarillo, Jeannie M., Greer, Joseph B., Early, Bryan P., Fellers, Ryan T., Kelleher, Neil L., Laskin, Julia

Source: Angewandte Chemie. 134(29)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100165408419.0x000001&indx=1&recIds=ETOCvdc_100165408419.0x000001

Inside Back Cover: Proteoform‐Selective Imaging of Tissues Using Mass Spectrometry (Angew. Chem. Int. Ed. 29/2022)

Authors: Yang, Manxi, Hu, Hang, Su, Pei, Thomas, Paul M., Camarillo, Jeannie M., Greer, Joseph B., Early, Bryan P., Fellers, Ryan T., Kelleher, Neil L., Laskin, Julia

Source: Angewandte Chemie international edition. 61(29)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100165426199.0x000001&indx=1&recIds=ETOCvdc_100165426199.0x000001

Innenrücktitelbild: Proteoform‐Selective Imaging of Tissues Using Mass Spectrometry (Angew. Chem. 29/2022)

Authors: Yang, Manxi, Hu, Hang, Su, Pei, Thomas, Paul M., Camarillo, Jeannie M., Greer, Joseph B., Early, Bryan P., Fellers, Ryan T., Kelleher, Neil L., Laskin, Julia

Source: Angewandte Chemie. 134(29)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100162704537.0x000001&indx=1&recIds=ETOCvdc_100162704537.0x000001

Quantitative Analysis and Discovery of Lysine and Arginine Modifications

Authors: Galligan, James J., Kingsley, Philip J., Wauchope, Orrette R., Mitchener, Michelle M., Camarillo, Jeannie M., Wepy, James A., Harris, Peter S., Fritz, Kristofer S., Marnett, Lawrence J.

Source: Analytical chemistry. 89(2):1299-1306

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN609744417&indx=1&recIds=ETOCRN609744417

Histone tail analysis reveals H3K36me2 and H4K16ac as epigenetic signatures of diffuse intrinsic pontine glioma.

Authors: An, Shejuan¹ (AUTHOR), Camarillo, Jeannie M.² (AUTHOR), Huang, Tina Yi-Ting¹ (AUTHOR), Li, Daphne³ (AUTHOR), Morris, Juliette A.² (AUTHOR), Zoltek, Madeline A.² (AUTHOR), Qi, Jin¹ (AUTHOR), Behbahani, Mandana⁴ (AUTHOR), Kambhampati, Madhuri⁵ (AUTHOR), Kelleher, Neil L.^2,6 (AUTHOR), Nazarian, Javad^5,7,8 (AUTHOR), Thomas, Paul M.² (AUTHOR), Saratsis, Amanda M.^1,6,9 (AUTHOR) asaratsis@luriechildrens.org

Source: Journal of Experimental & Clinical Cancer Research (17569966). 11/25/2020, Vol. 39 Issue 1, p1-16. 16p.

Automated imaging and identification of proteoforms directly from ovarian cancer tissue.

Authors: McGee, John P., Su, Pei, Durbin, Kenneth R., Hollas, Michael A. R., Bateman, Nicholas W., Maxwell, G. Larry, Conrads, Thomas P., Fellers, Ryan T., Melani, Rafael D., Camarillo, Jeannie M., Kafader, Jared O., Kelleher, Neil L.

Source: Nature Communications; 10/14/2023, Vol. 14 Issue 1, p1-11, 11p

Subject Terms: OVARIAN cancer, MASS spectrometry, OVARIAN follicle, TISSUES

Interdependent genotoxic mechanisms of monomethylarsonous acid: Role of ROS-induced DNA damage and poly(ADP-ribose) polymerase-1 inhibition in the malignant transformation of urothelial cells

Authors: Wnek, Shawn M., Kuhlman, Christopher L., Camarillo, Jeannie M., Medeiros, Matthew K., Liu, Ke J., Lau, Serrine S., Gandolfi, A.J.

Source: In Toxicology and Applied Pharmacology 2011 257(1):1-13

Zur and zinc increase expression of E. coli ribosomal protein L31 through RNA-mediated repression of the repressor L31p.

Authors: Rasmussen, Rebecca A, Wang, Suning, Camarillo, Jeannie M, Sosnowski, Victoria, Cho, Byoung-Kyu, Goo, Young Ah, Lucks, Julius B, O'Halloran, Thomas V

Source: Nucleic Acids Research; 12/9/2022, Vol. 50 Issue 22, p12739-12753, 15p

Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging

Authors: Quardokus, Ellen M., Saunders, Diane C., McDonough, Elizabeth, Hickey, John W., Werlein, Christopher, Surrette, Christine, Rajbhandari, Presha, Casals, Anna Martinez, Tian, Hua, Lowery, Lisa, Neumann, Elizabeth K., Björklund, Frida, Neelakantan, Taruna V., Croteau, Josh, Wiblin, Anne E., Fisher, Jeremy, Livengood, April J., Dowell, Karen G., Silverstein, Jonathan C., Spraggins, Jeffrey M., Pryhuber, Gloria S., Deutsch, Gail, Ginty, Fiona, Nolan, Garry P., Melov, Simon, Jonigk, Danny, Caldwell, Michael A., Vlachos, Ioannis S., Muller, Werner, Gehlenborg, Nils, Stockwell, Brent R., Lundberg, Emma, Snyder, Michael P., Germain, Ronald N., Camarillo, Jeannie M., Kelleher, Neil L., Börner, Katy, Radtke, Andrea J.

Source: Nature Methods; 20230101, Issue: Preprints p1-5, 5p

Sperm chromatin structure and reproductive fitness are altered by substitution of a single amino acid in mouse protamine 1

Authors: Moritz, Lindsay, Schon, Samantha B., Rabbani, Mashiat, Sheng, Yi, Agrawal, Ritvija, Glass-Klaiber, Juniper, Sultan, Caleb, Camarillo, Jeannie M., Clements, Jourdan, Baldwin, Michael R., Diehl, Adam G., Boyle, Alan P., O’Brien, Patrick J., Ragunathan, Kaushik, Hu, Yueh-Chiang, Kelleher, Neil L., Nandakumar, Jayakrishnan, Li, Jun Z., Orwig, Kyle E., Redding, Sy, Hammoud, Saher Sue

Source: Nature Structural and Molecular Biology; 20230101, Issue: Preprints p1-15, 15p

The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells.

Authors: Melani, Rafael D., Gerbasi, Vincent R., Anderson, Lissa C., Sikora, Jacek W., Toby, Timothy K., Hutton, Josiah E., Butcher, David S., Negrão, Fernanda, Seckler, Henrique S., Srzentic, Kristina, Fornelli, Luca, Camarillo, Jeannie M., LeDuc, Richard D., Cesnik, Anthony J., Lundberg, Emma, Greer, Joseph B., Fellers, Ryan T., Robey, Matthew T., DeHart, Caroline J., Forte, Eleonora

Source: Science; 1/28/2022, Vol. 375 Issue 6579, p411-418, 8p, 2 Color Photographs, 1 Diagram, 1 Graph

Evaluating Proteomics in a Rat Model of AKI

Authors: Schwabauer, Denise L., Camarillo, Jeannie M., Richards, Toni L., Liebler, Daniel C., Minor, Kenneth H.

Source: Journal of the American Society of Nephrology; October 2024, Vol. 35 Issue: 10, Number 10 Supplement 10

Histone H1 loss drives lymphoma by disrupting 3D chromatin architecture.

Authors: Yusufova, Nevin, Kloetgen, Andreas, Teater, Matt, Osunsade, Adewola, Camarillo, Jeannie M., Chin, Christopher R., Doane, Ashley S., Venters, Bryan J., Portillo-Ledesma, Stephanie, Conway, Joseph, Phillip, Jude M., Elemento, Olivier, Scott, David W., Béguelin, Wendy, Licht, Jonathan D., Kelleher, Neil L., Staudt, Louis M., Skoultchi, Arthur I., Keogh, Michael-Christopher, Apostolou, Effie

Source: Nature; 1/14/2021, Vol. 589 Issue 7841, p299-305, 7p

Targeted detection and quantitation of histone modifications from 1,000 cells.

Authors: Abshiru, Nebiyu A., Sikora, Jacek W., Camarillo, Jeannie M., Morris, Juliette A., Compton, Philip D., Lee, Tak, Neelamraju, Yaseswini, Haddox, Samuel, Sheridan, Caroline, Carroll, Martin, Cripe, Larry D., Tallman, Martin S., Paietta, Elisabeth M., Melnick, Ari M., Thomas, Paul M., Garrett-Bakelman, Francine E., Kelleher, Neil L.

Source: PLoS ONE; 10/26/2020, Vol. 15 Issue 10, p1-17, 17p

Subject Terms: HUMAN stem cells, ACUTE myeloid leukemia, CELL populations, POST-translational modification, HISTONE acetylation, CENTROMERE, CELL separation

This result is not displayed to guests.
Login for full access.