The tilting motion of the central core reveals the transport mechanism of the sarco/endoplasmic reticulum Ca2+-ATPase

Authors: Ma, Rulong, Briggs, James M.

Source: In International Journal of Biological Macromolecules June 2024 269 Part 1

Pharmacophore Oriented MP2 Characterization of Charge Distribution for Anti-SARS-CoV-2 Inhibitor Nirmatrelvir

Authors: Liu, Yuemin, Ma, Rulong, Fan, Huajun, Johnson, Bruce R., Briggs, James M.

Source: In Journal of Molecular Structure 15 October 2023 1290

QM/MM study of N501 involved intermolecular interaction between SARS-CoV-2 receptor binding domain and antibody of human origin

Authors: Liu, Yuemin, Sulaiman, Hana F., Johnson, Bruce R., Ma, Rulong, Gao, Yunxiang, Fernando, Harshica, Amarasekara, Ananda, Ashley-Oyewole, Andrea, Fan, Huajun, Ingram, Heaven N., Briggs, James M.

Source: In Computational Biology and Chemistry February 2023 102

Heterotropic roles of divalent cations in the establishment of allostery and affinity maturation of integrin αXβ2

Authors: Manandhar, Pragya, Mazhar, Zahra, Abousaway, Omar, Aboagye, Collins, Moussa, Zeinab, Lim, Daniel, Yu, Tannon, Byrnes, James, Briggs, James M., Sen, Mehmet

Source: In Cell Reports 23 August 2022 40(8)

RNAdemocracy: an ensemble method for RNA secondary structure prediction using consensus scoring

Authors: Skidmore, Benjamin L., Briggs, James M.

Source: In Computational Biology and Chemistry December 2019 83

Insights into the substrate binding specificity of quorum-quenching acylase PvdQ

Authors: Liu, Yanyun, Ebalunode, Jerry O., Briggs, James M.

Source: In Journal of Molecular Graphics and Modelling May 2019 88:104-120

Screening of Focused Compound Library Targeting Liver X Receptors in Pancreatic Cancer Identified Ligands with Inverse Agonist and Degrader Activity

Authors: Karaboga, Husna, Huang, Wentao, Srivastava, Shivangi, Widmann, Scott, Addanki, Sridevi, Gamage, Kasuni Thawalama, Mazhar, Zahra, Ebalunode, Jerry O., Briggs, James M., Gustafsson, Jan-Åke

Source: ACS chemical biology. 15(11):2916-2928

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN625891917&indx=1&recIds=ETOCRN625891917

Impact of lymphoma‐linked Asn11Tyr point mutation on the interaction between Bcl‐2 and a BH3 mimetic: Insights from molecular dynamics simulation

Authors: Singh, Khushboo, Briggs, James M.

Source: Chemical biology & drug design. 95(4):435-450

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100106673496.0x000001&indx=1&recIds=ETOCvdc_100106673496.0x000001

Immobilization and unbinding investigation of the antigen-antibody complex using theoretical and experimental techniques

Authors: Oliveira, Guedmiller S., Ierich, Jéssica C.M., Moraes, Ariana S., Silva, Gisela B.R.F., Liu, Yanyun, de S. Neto, Lourival R., Faria, Roberto R., Franca, Eduardo F., Freitas, Luiz C.G., Briggs, James M., Leite, Fabio L.

Source: In Journal of Molecular Graphics and Modelling January 2019 86:219-227

Functional Implications of the spectrum of BCL2 mutations in Lymphoma

Authors: Singh, Khushboo, Briggs, James M.

Source: In Mutation Research-Reviews in Mutation Research July-September 2016 769:1-18

Antibody mix-and-read assays based on fluorescence intensity probes

Authors: Patil, Ujwal, Goyal, Atul, Vu, Binh, Liu, Yanyun, Maranholkar, Vijay, Kourentzi, Katerina, Briggs, James M., Willson, Richard C.

Source: MAbs. 13(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100140348027.0x000001&indx=1&recIds=ETOCvdc_100140348027.0x000001

Normal and impaired charge transport in biological systems

Authors: Miller, John H., Jr., Villagrán, Martha Y. Suárez, Maric, Sladjana, Briggs, James M.

Source: In Physica B: Physics of Condensed Matter 1 March 2015 460:119-125

Associations between the Rho kinase-1 catalytic and PH domain regulatory unit

Authors: Craft, John W., Jr., Zhang, Hua, Charendoff, Marc N., Mindrebo, Jeffery T., Schwartz, Robert J., Briggs, James M.

Source: In Journal of Molecular Graphics and Modelling November 2013 46:74-82

Molecular modeling of enzyme attachment on AFM probes

Authors: Oliveira, Guedmiller S., Leite, Fabio L., Amarante, Adriano M., Franca, Eduardo F., Cunha, Richard A., Briggs, James M., Freitas, Luiz C.G.

Source: In Journal of Molecular Graphics and Modelling September 2013 45:128-136

Interactions of acetylcholine binding site residues contributing to nicotinic acetylcholine receptor gating: Role of residues Y93, Y190, K145 and D200

Authors: Mallipeddi, Prema L., Pedersen, Steen E., Briggs, James M.

Source: In Journal of Molecular Graphics and Modelling July 2013 44:145-154

Nucleophile activation in PD…(D/E)xK metallonucleases: An experimental and computational pK a study

Authors: Xie, Fuqian, Briggs, James M., Dupureur, Cynthia M.

Source: In Journal of Inorganic Biochemistry 2010 104(6):665-672

Measure and Cardinality

Authors: Briggs, James M., Schaffter, Thomas

Source: The American Mathematical Monthly, 1979 Dec 01. 86(10), 852-855.

Access URL: https://www.jstor.org/stable/2320153

Principal Ideals in $F$-Algebras

Authors: Briggs, James M.

Source: Proceedings of the American Mathematical Society, 1976 Oct 01. 60(1), 231-234.

Access URL: https://www.jstor.org/stable/2041148

Targeted reduction of the EGFR protein, but not inhibition of its kinase activity, induces mitophagy and death of cancer cells through activation of mTORC2 and Akt

Authors: Katreddy, Rajasekhara Reddy, Bollu, Lakshmi Reddy, Su, Fei, Xian, Na, Srivastava, Shivangi, Thomas, Rintu, Dai, Yubing, Wu, Bing, Xu, Yunlu, Rea, Michael A., Briggs, James M., Zhang, Qingyuan, Lu, Xiongbin, Huang, Gangxiong, Weihua, Zhang

Source: Oncogenesis. 7(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100105152603.0x000001&indx=1&recIds=ETOCvdc_100105152603.0x000001

Hybrid Quantum Mechanical/Molecular Mechanical Molecular Dynamics Simulations of HIV-1 Integrase/Inhibitor Complexes

Authors: Nunthaboot, Nadtanet, Pianwanit, Somsak, Parasuk, Vudhichai, Ebalunode, Jerry O., Briggs, James M., Kokpol, Sirirat

Source: In Biophysical Journal 2007 93(10):3613-3626