Identifying Functional Brain Networks of Spatiotemporal Wide-Field Calcium Imaging Data via a Long Short-Term Memory Autoencoder

Authors: Zhang, Xiaohui, Landsness, Eric C, Brier, Lindsey M, Chen, Wei, Tang, Michelle J., Miao, Hanyang, Lee, Jin-Moo, Anastasio, Mark A., Culver, Joseph P.

Subject Terms: Electrical Engineering and Systems Science - Image and Video Processing

Access URL: http://arxiv.org/abs/2405.19685

Attention-based CNN-BiLSTM for sleep state classification of spatiotemporal wide-field calcium imaging data

Authors: Zhang, Xiaohui, Landsness, Eric C., Miao, Hanyang, Chen, Wei, Tang, Michelle J., Brier, Lindsey M., Culver, Joseph P., Lee, Jin-Moo, Anastasio, Mark A.

Source: In Journal of Neuroscience Methods November 2024 411

Automated sleep state classification of wide-field calcium imaging data via multiplex visibility graphs and deep learning

Authors: Zhang, Xiaohui, Landsness, Eric C., Chen, Wei, Miao, Hanyang, Tang, Michelle, Brier, Lindsey M., Culver, Joseph P., Lee, Jin-Moo, Anastasio, Mark A.

Source: In Journal of Neuroscience Methods 15 January 2022 366

Endothelial ether lipids link the vasculature to blood pressure, behavior, and neurodegeneration

Authors: Spears, Larry D., Adak, Sangeeta, Dong, Guifang, Wei, Xiaochao, Spyropoulos, George, Zhang, Qiang, Yin, Li, Feng, Chu, Hu, Donghua, Lodhi, Irfan J., Hsu, Fong-Fu, Rajagopal, Rithwick, Noguchi, Kevin K., Halabi, Carmen M., Brier, Lindsey, Bice, Annie R., Lananna, Brian V., Musiek, Erik S., Avraham, Oshri, Cavalli, Valeria, Holth, Jerrah K., Holtzman, David M., Wozniak, David F., Culver, Joseph P., Semenkovich, Clay F.

Source: In Journal of Lipid Research 2021 62

Functional Connectivity of the Developing Mouse Cortex

Authors: Rahn, Rachel M, Brier, Lindsey M, Bice, Annie R, Reisman, Matthew D, Dougherty, Joseph D, Culver, Joseph P

Source: Cerebral cortex. 32(8):1755-1768

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100148517091.0x000001&indx=1&recIds=ETOCvdc_100148517091.0x000001

A Multivariate Functional Connectivity Approach to Mapping Brain Networks and Imputing Neural Activity in Mice

Authors: Brier, Lindsey M, Zhang, Xiaohui, Bice, Annie R, Gaines, Seana H, Landsness, Eric C, Lee, Jin-Moo, Anastasio, Mark A, Culver, Joseph P

Source: Cerebral cortex. 32(8):1593-1607

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100148516989.0x000001&indx=1&recIds=ETOCvdc_100148516989.0x000001

ESM-CT: a precise method for localization of DBS electrodes in CT images

Authors: Milchenko, Mikhail, Snyder, Abraham Z., Campbell, Meghan C., Dowling, Joshua L., Rich, Keith M., Brier, Lindsey M., Perlmutter, Joel S., Norris, Scott A.

Source: In Journal of Neuroscience Methods 1 October 2018 308:366-376

Astrocyte deletion of α2-Na/K ATPase triggers episodic motor paralysis in mice via a metabolic pathway

Authors: Smith, Sarah E., Chen, Xiaoying, Brier, Lindsey M., Bumstead, Jonathan R., Rensing, Nicholas R., Ringel, Alison E., Shin, Haewon, Oldenborg, Anna, Crowley, Jan R., Bice, Annie R., Dikranian, Krikor, Ippolito, Joseph E., Haigis, Marcia C., Papouin, Thomas, Zhao, Guoyan, Wong, Michael, Culver, Joseph P., Bonni, Azad

Source: Nature communications. 11(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100190821833.0x000001&indx=1&recIds=ETOCvdc_100190821833.0x000001

Mecp2 deletion results in profound alterations of developmental and adult functional connectivity.

Authors: Rahn, Rachel M, Yen, Allen, Chen, Siyu, Gaines, Seana H, Bice, Annie R, Brier, Lindsey M, Swift, Raylynn G, Lee, LeiLani, Maloney, Susan E, Culver, Joseph P, Dougherty, Joseph D

Source: Cerebral Cortex; 6/15/2023, Vol. 33 Issue 12, p7436-7453, 18p

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Functional connectivity structure of cortical calcium dynamics in anesthetized and awake mice.

Authors: Wright, Patrick W.^1,2, Brier, Lindsey M.³, Bauer, Adam Q.², Baxter, Grant A.², Kraft, Andrew W.³, Reisman, Matthew D.^2,4, Bice, Annie R.², Snyder, Abraham Z.², Lee, Jin-Moo^1,2,5, Culver, Joseph P.^1,2,3 culverj@wustl.edu

Source: PLoS ONE. 10/19/2017, Vol. 12 Issue 10, p1-27. 27p.

Subject Terms: *CALCIUM, *DIAGNOSTIC imaging, *MENTAL depression, *LABORATORY mice, *HEMODYNAMICS

SIRT1 mediates hypoxic postconditioning- and resveratrol-induced protection against functional connectivity deficits after subarachnoid hemorrhage.

Authors: Clarke, Julian V¹ (AUTHOR), Brier, Lindsey M² (AUTHOR), Rahn, Rachel M² (AUTHOR), Diwan, Deepti¹ (AUTHOR), Yuan, Jane Y¹ (AUTHOR), Bice, Annie R² (AUTHOR), Imai, Shin-ichiro³ (AUTHOR), Vellimana, Ananth K¹ (AUTHOR), Culver, Joseph P² (AUTHOR), Zipfel, Gregory J¹ (AUTHOR) zipfelg@wustl.edu

Source: Journal of Cerebral Blood Flow & Metabolism. Jul2022, Vol. 42 Issue 7, p1210-1223. 14p.

Multivariate Functional Connectivity Approach to Mapping Brain Networks and Imputing Neural Activity in Mice.

Authors: Brier, Lindsey M, Zhang, Xiaohui, Bice, Annie R, Gaines, Seana H, Landsness, Eric C, Lee, Jin-Moo, Anastasio, Mark A, Culver, Joseph P

Source: Cerebral Cortex; 4/15/2022, Vol. 32 Issue 8, p1593-1607, 15p

Functional Connectivity of the Developing Mouse Cortex.

Authors: Rahn, Rachel M, Brier, Lindsey M, Bice, Annie R, Reisman, Matthew D, Dougherty, Joseph D, Culver, Joseph P

Source: Cerebral Cortex; 4/15/2022, Vol. 32 Issue 8, p1755-1768, 14p

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Open-source statistical and data processing tools for wide-field optical imaging data in mice.

Authors: Brier, Lindsey M., Culver, Joseph P.

Source: Neurophotonics; Jan-Mar2023, Vol. 10 Issue 1, p16601-16601, 1p

BiophysicalCharacteristics of Cholera Toxin and Escherichia coliHeat-Labile Enterotoxin Structure and Chemistry Lead to DifferentialToxicity.

Authors: Craft, John W.¹, Shen, Tsai-wei¹, Brier, Lindsey M.¹, Briggs, James M.¹

Source: Journal of Physical Chemistry B; Jan2015, Vol. 119 Issue 3, p1048-1061, 14p

Open-source statistical and data processing tools for wide-field optical imaging data in mice

Authors: Brier, Lindsey M., Culver, Joseph P.

Source: Neurophotonics; December 2022, Vol. 10 Issue: 1 p016601-016601, 1p