Comment on Buss et al., Science 2021: An alternative, empirically-supported adjustment for sero-reversion yields a 10 percentage point lower estimate of the cumulative incidence of SARS-CoV-2 in Manaus by October 2020

Authors: Kadelka, Sarah, Bouman, Judith A, Ashcroft, Peter, Regoes, Roland R

Subject Terms: Quantitative Biology - Populations and Evolution

Access URL: http://arxiv.org/abs/2103.13951

COVID-19 infectivity profile correction

Authors: Ashcroft, Peter, Huisman, Jana S., Lehtinen, Sonja, Bouman, Judith A., Althaus, Christian L., Regoes, Roland R., Bonhoeffer, Sebastian

Subject Terms: Quantitative Biology - Populations and Evolution, Statistics - Methodology

Access URL: http://arxiv.org/abs/2007.06602

Bayesian workflow for time-varying transmission in stratified compartmental infectious disease transmission models.

Authors: Bouman, Judith A.^1,2 (AUTHOR) judith.bouman@unibe.ch, Hauser, Anthony^1,3 (AUTHOR), Grimm, Simon L.^1,4 (AUTHOR), Wohlfender, Martin^1,2 (AUTHOR), Bhatt, Samir^5,6 (AUTHOR), Semenova, Elizaveta⁷ (AUTHOR), Gelman, Andrew^8,9 (AUTHOR), Althaus, Christian L.^1,2 (AUTHOR), Riou, Julien¹⁰ (AUTHOR) judith.bouman@unibe.ch

Source: PLoS Computational Biology. 4/29/2024, Vol. 20 Issue 4, p1-19. 19p.

Subject Terms: *INFECTIOUS disease transmission, *WORKFLOW, *ORDINARY differential equations, *BROWNIAN motion, *GAUSSIAN processes, *SEROPREVALENCE

Geographic Terms: GENEVA (Switzerland)

Applying mixture model methods to SARS-CoV-2 serosurvey data from Geneva

Authors: Bouman, Judith A., Kadelka, Sarah, Stringhini, Silvia, Pennacchio, Francesco, Meyer, Benjamin, Yerly, Sabine, Kaiser, Laurent, Guessous, Idris, Azman, Andrew S., Bonhoeffer, Sebastian, Regoes, Roland R.

Source: In Epidemics June 2022 39

Intestinal epithelial NAIP/NLRC4 restricts systemic dissemination of the adapted pathogen Salmonella Typhimurium due to site-specific bacterial PAMP expression

Authors: Hausmann, Annika, Böck, Desirée, Geiser, Petra, Berthold, Dorothée L., Fattinger, Stefan A., Furter, Markus, Bouman, Judith A., Barthel-Scherrer, Manja, Lang, Crispin M., Bakkeren, Erik, Kolinko, Isabel, Diard, Médéric, Bumann, Dirk, Slack, Emma, Regoes, Roland R., Pilhofer, Martin, Sellin, Mikael E., Hardt, Wolf-Dietrich

Source: In Mucosal Immunology 1 May 2020 13(3):530-544

Correcting for Antibody Waning in Cumulative Incidence Estimation From Sequential Serosurveys.

Authors: Kadelka, Sarah (AUTHOR) sarah.kadelka@env.ethz.ch, Bouman, Judith A (AUTHOR), Ashcroft, Peter (AUTHOR), Regoes, Roland R (AUTHOR) sarah.kadelka@env.ethz.ch

Source: American Journal of Epidemiology. May2024, Vol. 193 Issue 5, p777-786. 10p.

Subject Terms: *VIRAL antibodies, *COMMUNICABLE diseases, *STATISTICAL models, *RESEARCH funding, *PROBABILITY theory, *DESCRIPTIVE statistics, *CONFIDENCE intervals, *COVID-19, *SARS-CoV-2, *EPIDEMIOLOGICAL research, *DISEASE incidence, *IMMUNITY

Geographic Terms: BRAZIL

Estimating the cumulative incidence of SARS-CoV-2 with imperfect serological tests: Exploiting cutoff-free approaches.

Authors: Bouman, Judith A.¹ (AUTHOR) judith.bouman@env.ethz.ch, Riou, Julien² (AUTHOR), Bonhoeffer, Sebastian¹ (AUTHOR), Regoes, Roland R.¹ (AUTHOR) judith.bouman@env.ethz.ch

Source: PLoS Computational Biology. 2/26/2021, Vol. 17 Issue 2, p1-19. 19p. 1 Chart, 7 Graphs.

Subject Terms: *SERODIAGNOSIS, *SARS-CoV-2, *COVID-19 pandemic, *ANTIBODY titer, *ANTIBODY formation, *VIRAL antibodies

Per-pathogen virulence of HIV-1 subtypes A, C and D.

Authors: Bouman, Judith A.¹ judith.bouman@env.ethz.ch, Venner, Colin M.², Walker, Courtney², Arts, Eric J.², Regoes, Roland R.¹ roland.regoes@env.ethz.ch

Source: Proceedings of the Royal Society B: Biological Sciences. 5/10/2023, Vol. 290 Issue 1998, p1-10. 10p.

Subject Terms: *HIV, *HIV infections, *VIRAL load, *INFECTION, *SYMPTOMS

Intestinal epithelial NAIP/NLRC4 restricts systemic dissemination of the adapted pathogen SalmonellaTyphimurium due to site-specific bacterial PAMP expression

Authors: Hausmann, Annika, Böck, Desirée, Geiser, Petra, Berthold, Dorothée L., Fattinger, Stefan A., Furter, Markus, Bouman, Judith A., Barthel-Scherrer, Manja, Lang, Crispin M., Bakkeren, Erik, Kolinko, Isabel, Diard, Médéric, Bumann, Dirk, Slack, Emma, Regoes, Roland R., Pilhofer, Martin, Sellin, Mikael E., Hardt, Wolf-Dietrich

Source: Mucosal Immunology; May 2020, Vol. 13 Issue: 3 p530-544, 15p