RenalSegNet: automated segmentation of renal tumor, veins, and arteries in contrast-enhanced CT scans

Authors: Rashid Khan, Chao Chen, Asim Zaman, Jiayi Wu, Haixing Mai, Liyilei Su, Yan Kang, Bingding Huang

Source: Complex & Intelligent Systems, Vol 11, Iss 2, Pp 1-20 (2025)

Subject Terms: RenalSegNet, Kidney cancer, Contrast-enhanced CT scans, MedSegPath, Deep learning, Electronic computers. Computer science, QA75.5-76.95, Information technology, T58.5-58.64

File Description: electronic resource

Relation: https://doaj.org/toc/2199-4536; https://doaj.org/toc/2198-6053

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NanoAbLLaMA: construction of nanobody libraries with protein large language models

Authors: Xin Wang, Haotian Chen, Bo Chen, Lixin Liang, Fengcheng Mei, Bingding Huang

Source: Frontiers in Chemistry, Vol 13 (2025)

Subject Terms: reinforcement learning, generative AI, nanobodies, libraries, protein large language models, Chemistry, QD1-999

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fchem.2025.1545136/full; https://doaj.org/toc/2296-2646

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MLAU-Net: Deep supervised attention and hybrid loss strategies for enhanced segmentation of low-resolution kidney ultrasound

Authors: Rashid Khan, Asim Zaman, Chao Chen, Chuda Xiao, Wen Zhong, Yang Liu, Haseeb Hassan, Liyilei Su, Weiguo Xie, Yan Kang, Bingding Huang

Source: Digital Health, Vol 10 (2024)

Subject Terms: Computer applications to medicine. Medical informatics, R858-859.7

File Description: electronic resource

Relation: https://doaj.org/toc/2055-2076

Access URL: https://doaj.org/article/d1d7c2034a114ad3b3c7b09c06796bfe

A Review of Touching-Based Underwater Robotic Perception and Manipulation

Authors: Jia Sun, Qifeng Zhang, Yu Lu, Bingding Huang, Qiang Li

Source: Machines, Vol 13, Iss 1, p 41 (2025)

Subject Terms: tactile sensor, force control, underwater robotics manipulation, Mechanical engineering and machinery, TJ1-1570

File Description: electronic resource

Relation: https://www.mdpi.com/2075-1702/13/1/41; https://doaj.org/toc/2075-1702

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NanoBERTa-ASP: predicting nanobody paratope based on a pretrained RoBERTa model

Authors: Shangru Li, Xiangpeng Meng, Rui Li, Bingding Huang, Xin Wang

Source: BMC Bioinformatics, Vol 25, Iss 1, Pp 1-9 (2024)

Subject Terms: Nanobodies, RoBERTa, Pretrained model, prediction of binding sites, Antibody engineering, Transfer learning, Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2105

Access URL: https://doaj.org/article/050fd73874944c37a7ea0f8d82230b82

Customized m-RCNN and hybrid deep classifier for liver cancer segmentation and classification

Authors: Rashid Khan, Liyilei Su, Asim Zaman, Haseeb Hassan, Yan Kang, Bingding Huang

Source: Heliyon, Vol 10, Iss 10, Pp e30528- (2024)

Subject Terms: Liver cancer classification, Medical image segmentation, cm-RCNN, AHE and e-MBP, Science (General), Q1-390, Social sciences (General), H1-99

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2405844024065599; https://doaj.org/toc/2405-8440

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Adaptive Feature Medical Segmentation Network: an adaptable deep learning paradigm for high-performance 3D brain lesion segmentation in medical imaging

Authors: Asim Zaman, Haseeb Hassan, Xueqiang Zeng, Rashid Khan, Jiaxi Lu, Huihui Yang, Xiaoqiang Miao, Anbo Cao, Yingjian Yang, Bingding Huang, Yingwei Guo, Yan Kang

Source: Frontiers in Neuroscience, Vol 18 (2024)

Subject Terms: medical image analysis, brain lesion segmentation, adaptive feature extraction, attention mechanism, encoder-decoder architecture, computer-aided diagnosis, Neurosciences. Biological psychiatry. Neuropsychiatry, RC321-571

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Relation: https://www.frontiersin.org/articles/10.3389/fnins.2024.1363930/full; https://doaj.org/toc/1662-453X

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Automated Tomato Leaf Disease Detection Using Image Processing: An SVM-Based Approach with GLCM and SIFT Features

Authors: Rashid Khan, Nasir Ud Din, Asim Zaman, Bingding Huang

Source: Journal of Engineering, Vol 2024 (2024)

Subject Terms: Engineering (General). Civil engineering (General), TA1-2040

File Description: electronic resource

Relation: https://doaj.org/toc/2314-4912

Access URL: https://doaj.org/article/7363adf6ed3646a0a7631c8f5297155e

Correction: NanoBERTa-ASP: predicting nanobody paratope based on a pretrained RoBERTa model

Authors: Shangru Li, Xiangpeng Meng, Rui Li, Bingding Huang, Xin Wang

Source: BMC Bioinformatics, Vol 25, Iss 1, Pp 1-1 (2024)

Subject Terms: Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2105

Access URL: https://doaj.org/article/bb3c7951246440d499c12435b64c04f4

Iterative In Silico Screening for Optimizing Stable Conformation of Anti-SARS-CoV-2 Nanobodies

Authors: Wenyuan Shang, Xiujun Hu, Xiaoman Lin, Shangru Li, Shuchang Xiong, Bingding Huang, Xin Wang

Source: Pharmaceuticals, Vol 17, Iss 4, p 424 (2024)

Subject Terms: nanobody, in silico screening, protein docking, COVID-19, Medicine, Pharmacy and materia medica, RS1-441

File Description: electronic resource

Relation: https://www.mdpi.com/1424-8247/17/4/424; https://doaj.org/toc/1424-8247

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Benchmarking HLA genotyping and clarifying HLA impact on survival in tumor immunotherapy

Authors: Xiangyong Li, Chi Zhou, Ke Chen, Bingding Huang, Qi Liu, Hao Ye

Source: Molecular Oncology, Vol 15, Iss 7, Pp 1764-1782 (2021)

Subject Terms: HLA genotyping, immune cytolytic activity, tumor immunotherapy, tumor mutation burden, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/1574-7891; https://doaj.org/toc/1878-0261

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A Robust Brain Tumor Detector Using BiLSTM and Mayfly Optimization and Multi-Level Thresholding

Authors: Rabbia Mahum, Mohamed Sharaf, Haseeb Hassan, Lixin Liang, Bingding Huang

Source: Biomedicines, Vol 11, Iss 6, p 1715 (2023)

Subject Terms: machine learning, deep learning, detection, classification, multiscale features, features fusion, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.mdpi.com/2227-9059/11/6/1715; https://doaj.org/toc/2227-9059

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SinoDuplex: An Improved Duplex Sequencing Approach to Detect Low-frequency Variants in Plasma cfDNA Samples

Authors: Yongzhe Ren, Yang Zhang, Dandan Wang, Fengying Liu, Ying Fu, Shaohua Xiang, Li Su, Jiancheng Li, Heng Dai, Bingding Huang

Source: Genomics, Proteomics & Bioinformatics, Vol 18, Iss 1, Pp 81-90 (2020)

Subject Terms: Next generation sequencing, Liquid biopsy, Circulating tumor DNA, Duplex sequencing, Low frequency variant, Biology (General), QH301-705.5, Computer applications to medicine. Medical informatics, R858-859.7

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1672022920300541; https://doaj.org/toc/1672-0229

Access URL: https://doaj.org/article/5d52f997dbb74c6d96f96497049d0b86

Epigenetic alterations are associated with tumor mutation burden in non-small cell lung cancer

Authors: Liangliang Cai, Hua Bai, Jianchun Duan, Zhijie Wang, Shugeng Gao, Di Wang, Shuhang Wang, Jun Jiang, Jiefei Han, Yanhua Tian, Xue Zhang, Hao Ye, Minghui Li, Bingding Huang, Jie He, Jie Wang

Source: Journal for ImmunoTherapy of Cancer, Vol 7, Iss 1, Pp 1-11 (2019)

Subject Terms: Genetics, Epigenetics, Non-small cell lung cancer, Tumor mutation burden, Checkpoint inhibitor therapy, Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s40425-019-0660-7; https://doaj.org/toc/2051-1426

Access URL: https://doaj.org/article/083e15cc0c5b43eebfdef77c7b3119f8

Single-Stage Pulmonary Resection via a Combination of Single Hookwire Localization and Video-Assisted Thoracoscopic Surgery for Synchronous Multiple Pulmonary Nodules

Authors: Xianglan Jin MD, Tiegong Wang MD, PhD, Luguang Chen MSc, Pengyi Xing MD, PhD, Xiaoyun Wu MD, PhD, Chengwei Shao MD, PhD, Bingding Huang PhD, Wangfu Zang MD, PhD

Source: Technology in Cancer Research & Treatment, Vol 20 (2021)

Subject Terms: Neoplasms. Tumors. Oncology. Including cancer and carcinogens, RC254-282

File Description: electronic resource

Relation: https://doaj.org/toc/1533-0338

Access URL: https://doaj.org/article/84ed4e5131934a35ba2f21d9a088c53a

Deep Segmentation Networks for Segmenting Kidneys and Detecting Kidney Stones in Unenhanced Abdominal CT Images

Authors: Dan Li, Chuda Xiao, Yang Liu, Zhuo Chen, Haseeb Hassan, Liyilei Su, Jun Liu, Haoyu Li, Weiguo Xie, Wen Zhong, Bingding Huang

Source: Diagnostics, Vol 12, Iss 8, p 1788 (2022)

Subject Terms: semantic segmentation networks, kidney segmentation, kidney detection, kidney stone segmentation, kidney stone detection, computed tomography, Medicine (General), R5-920

File Description: electronic resource

Relation: https://www.mdpi.com/2075-4418/12/8/1788; https://doaj.org/toc/2075-4418

Access URL: https://doaj.org/article/953f40b138ab4df2b16cd8193bc8b26d

Deep Learning Applications in Computed Tomography Images for Pulmonary Nodule Detection and Diagnosis: A Review

Authors: Rui Li, Chuda Xiao, Yongzhi Huang, Haseeb Hassan, Bingding Huang

Source: Diagnostics, Vol 12, Iss 2, p 298 (2022)

Subject Terms: lung cancer, deep learning, lung nodule segmentation and classification, lung nodule computer-aided diagnosis, Medicine (General), R5-920

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Relation: https://www.mdpi.com/2075-4418/12/2/298; https://doaj.org/toc/2075-4418

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SIRT7-dependent deacetylation of the U3-55k protein controls pre-rRNA processing

Authors: Sifan Chen, Maximilian Felix Blank, Aishwarya Iyer, Bingding Huang, Lin Wang, Ingrid Grummt, Renate Voit

Source: Nature Communications, Vol 7, Iss 1, Pp 1-11 (2016)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/abe8d6944d854bd2b55474b4c6418e77

Adaptive Feature Medical Segmentation Network: an adaptable deep learning paradigm for high-performance 3D brain lesion segmentation in medical imaging.

Authors: Zaman, Asim, Hassan, Haseeb, Xueqiang Zeng, Khan, Rashid, Jiaxi Lu, Huihui Yang, Xiaoqiang Miao, Anbo Cao, Yingjian Yang, Bingding Huang, Yingwei Guo, Yan Kang

Source: Frontiers in Neuroscience; 2024, p01-20, 20p

Subject Terms: COMPUTER-assisted image analysis (Medicine), BRAIN damage, DEEP learning, DIAGNOSTIC imaging, IMAGE segmentation

SOX2 Targets Fibronectin 1 to Promote Cell Migration and Invasion in Ovarian Cancer: New Molecular Leads for Therapeutic Intervention.

Authors: Xiaoyan Lou, Xu Han, Chengmeng Jin, Wei Tian, Wei Yu, Dong Ding, Lihua Cheng, Bingding Huang, Huawei Jiang, Biaoyang Lin

Source: OMICS: A Journal of Integrative Biology; Oct2013, Vol. 17 Issue 10, p510-518, 9p