Comparing representations of high-dimensional data with persistent homology: a case study in neuroimaging

Authors: Easley, Ty, Freese, Kevin, Munch, Elizabeth, Bijsterbosch, Janine

Subject Terms: Computer Science - Computational Geometry, Electrical Engineering and Systems Science - Image and Video Processing, Mathematics - Algebraic Topology, Quantitative Biology - Neurons and Cognition

Access URL: http://arxiv.org/abs/2306.13802

Comparing Data-Driven Subtypes of Depression Informed by Clinical and Neuroimaging Data: A Registered Report

Authors: Hannon, Kayla ^{a, ∗}, Jarukasemkit, Setthanan ^{a, b}, Balogh, Leda ^{a, c}, Ahmad, Fyzeen ^{a, d}, Lenzini, Petra ^a, Sotiras, Aristeidis ^{a, e}, Bijsterbosch, Janine D. ^{a, ∗}

Source: In Biological Psychiatry Global Open Science February 2025

Associations between prenatal caffeine exposure and child development: Longitudinal results from the Adolescent Brain Cognitive Development (ABCD) Study

Authors: Modi, Hailey ^{a, b}, Baranger, David A.A. ^a, Paul, Sarah E. ^a, Gorelik, Aaron J. ^a, Hornstein, Alana ^a, Balbona, Jared V. ^b, Agrawal, Arpana ^b, Bijsterbosch, Janine D. ^c, Bogdan, Ryan ^{a, ⁎}

Source: In Neurotoxicology and Teratology January-February 2025 107

Associations between COVID-19 and putative markers of neuroinflammation: A diffusion basis spectrum imaging study

Authors: Zhang, Wei, Gorelik, Aaron J., Wang, Qing, Norton, Sara A., Hershey, Tamara, Agrawal, Arpana, Bijsterbosch, Janine D., Bogdan, Ryan

Source: In Brain, Behavior, & Immunity - Health March 2024 36

Investigating the Relationship Between Smoking Behavior and Global Brain Volume

Authors: Chang, Yoonhoo, Thornton, Vera, Chaloemtoem, Ariya, Anokhin, Andrey P., Bijsterbosch, Janine, Bogdan, Ryan, Hancock, Dana B., Johnson, Eric Otto, Bierut, Laura J.

Source: In Biological Psychiatry Global Open Science January 2024 4(1):74-82

Neuroinflammation in the Amygdala Is Associated With Recent Depressive Symptoms

Authors: Zhang, Wei, Rutlin, Jerrel, Eisenstein, Sarah A., Wang, Yong, Barch, Deanna M., Hershey, Tamara, Bogdan, Ryan, Bijsterbosch, Janine D.

Source: In Biological Psychiatry: Cognitive Neuroscience and Neuroimaging September 2023 8(9):967-975

Population modeling with machine learning can enhance measures of mental health - Open-data replication

Authors: Easley, Ty, Chen, Ruiqi, Hannon, Kayla, Dutt, Rosie, Bijsterbosch, Janine

Source: In Neuroimage: Reports June 2023 3(2)

Comparison between gradients and parcellations for functional connectivity prediction of behavior

Authors: Kong, Ru, Tan, Yan Rui, Wulan, Naren, Ooi, Leon Qi Rong, Farahibozorg, Seyedeh-Rezvan, Harrison, Samuel, Bijsterbosch, Janine D., Bernhardt, Boris C., Eickhoff, Simon, Thomas Yeo, B.T.

Source: In NeuroImage June 2023 273

Amplitudes of resting-state functional networks – investigation into their correlates and biophysical properties

Authors: Lee, Soojin, Bijsterbosch, Janine D., Almagro, Fidel Alfaro, Elliott, Lloyd, McCarthy, Paul, Taschler, Bernd, Sala-Llonch, Roser, Beckmann, Christian F., Duff, Eugene P., Smith, Stephen M., Douaud, Gwenaëlle

Source: In NeuroImage January 2023 265

Mental health in the UK Biobank: A roadmap to self‐report measures and neuroimaging correlates

Authors: Dutt, Rosie K, Hannon, Kayla, Easley, Ty O, Griffis, Joseph C, Zhang, Wei, Bijsterbosch, Janine D

Source: Human brain mapping. 43(2):816-832

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100138775463.0x000001&indx=1&recIds=ETOCvdc_100138775463.0x000001

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Recent developments in representations of the connectome

Authors: Bijsterbosch, Janine D., Valk, Sofie L., Wang, Danhong, Glasser, Matthew F.

Source: In NeuroImage November 2021 243

Hierarchical modelling of functional brain networks in population and individuals from big fMRI data

Authors: Farahibozorg, Seyedeh-Rezvan, Bijsterbosch, Janine D., Gong, Weikang, Jbabdi, Saad, Smith, Stephen M., Harrison, Samuel J., Woolrich, Mark W.

Source: In NeuroImage November 2021 243

Current best practices and future opportunities for reproducible findings using large-scale neuroimaging in psychiatry

Authors: Jahanshad, Neda, Lenzini, Petra, Bijsterbosch, Janine

Source: Neuropsychopharmacology; January 2025, Vol. 50 Issue: 1 p37-51, 15p

Higher amplitudes of visual networks are associated with trait- but not state-depression.

Authors: Zhang, Wei, Dutt, Rosie, Lew, Daphne, Barch, Deanna M., Bijsterbosch, Janine D.

Source: Psychological Medicine; Dec2024, Vol. 54 Issue 16, p4856-4867, 12p

Subject Terms: MENTAL depression risk factors, RISK assessment, RESEARCH funding, NEURAL pathways, MAGNETIC resonance imaging, DISEASE remission, LONGITUDINAL method, LARGE-scale brain networks, PERSONALITY, NEURORADIOLOGY, MENTAL depression, PATHOLOGICAL psychology

Hippocampal volumes in UK Biobank are associated with APOE only in older adults.

Authors: Chaloemtoem, Ariya, Thornton, Vera, Chang, Yoonhoo, Anokhin, Andrey P., Belloy, Michaël E., Bijsterbosch, Janine, Gordon, Brian A., Hartz, Sarah M., Bierut, Laura J.

Source: Alzheimer's & Dementia: Diagnosis, Assessment & Disease Monitoring; Oct2024, Vol. 16 Issue 4, p1-9, 9p

Subject Terms: APOLIPOPROTEIN E, ALZHEIMER'S disease, OLDER people, NEURODEGENERATION, HIPPOCAMPUS (Brain)

Modelling subject variability in the spatial and temporal characteristics of functional modes

Authors: Harrison, Samuel J., Bijsterbosch, Janine D., Segerdahl, Andrew R., Fitzgibbon, Sean P., Farahibozorg, Seyedeh-Rezvan, Duff, Eugene P., Smith, Stephen M., Woolrich, Mark W.

Source: In NeuroImage 15 November 2020 222

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Classification of temporal ICA components for separating global noise from fMRI data: Reply to Power

Authors: Glasser, Matthew F., Coalson, Timothy S., Bijsterbosch, Janine D., Harrison, Samuel J., Harms, Michael P., Anticevic, Alan, Van Essen, David C., Smith, Stephen M.

Source: In NeuroImage 15 August 2019 197:435-438

Depression and the prefrontal-hippocampal pathway - A multimodal neuroimaging study in transgender women

Authors: Jarukasemkit, Setthanan ^{a, b, c}, Tam, Karen M. ^a, Yoadsanit, Seksan ^a, Easley, Ty ^b, Modi, Hailey ^b, Stahl, Lyn ^b, Kampaengtip, Adun ^a, Chansakul, Thanissara ^a, Janamnuaysook, Rena ^{d, e}, Hiransuthikul, Akarin ^{d, f}, Chunharas, Chaipat ^{c, ⁎, 1}, Bijsterbosch, Janine D. ^{b, ⁎⁎, 1}

Source: In Comprehensive Psychoneuroendocrinology May 2025 22