A CNN-Transformer for Classification of Longitudinal 3D MRI Images -- A Case Study on Hepatocellular Carcinoma Prediction

Authors: Nolte, Jakob, Guichelaar, Maureen M. J., Bouman, Donald E., Berg, Stephanie M. van den, Haeri, Maryam Amir

Subject Terms: Computer Science - Computer Vision and Pattern Recognition, I.4.9, I.2.1

Access URL: http://arxiv.org/abs/2501.10733

Impact of postprogression therapies on overall survival: Recommendations from the 2023 kidney cancer association think tank meeting

Authors: Berg, Stephanie A. ^{a, ⁎}, La Rosa, Salvatore ^b, Zhang, Tian ^c, Pierorazio, Phillip M. ^d, Albiges, Laurence ^e, Beckermann, Kathryn E. ^f, Campbell, Matthew T. ^g, Carlo, Maria I. ^h, Coleman, Katie ⁱ, George, Daniel J. ^j, Geynisman, Daniel M. ^k, Johnson, Ritchie ^l, Jonasch, Eric ^g, Maranchie, Jodi K. ^m, McGregor, Bradley A. ^a, Shapiro, Daniel D. ⁿ, Singer, Eric A. ^o, Shuch, Brian M. ^p, Stadler, Walter M. ^q, Tannir, Nizar M. ^g, Zakharia, Yousef ^r, Vaishampayan, Ulka N. ^s, Thall, Peter F. ^t, Msaouel, Pavlos ^{g, u, v, ⁎}

Source: In Urologic Oncology: Seminars and Original Investigations March 2025 43(3):135-146

CDK4/6 Inhibition With Abemaciclib in Patients With Previously Treated Advanced Renal Cell Carcinoma

Authors: McGregor, Bradley A. ^{1, ⁎}, Xie, Wanling ¹, Berg, Stephanie A. ¹, Xu, Wenxin ¹, Viswanathan, Srinivas R. ¹, McDermott, David ², Signoretti, Sabina ³, Kaelin, William G, Jr ¹, Choueiri, Toni K. ¹

Source: In Clinical Genitourinary Cancer June 2025 23(3)

A Characterization of Chemistry Learners' Engagement in Data Analysis and Interpretation

Authors: Berg, Stephanie A. (ORCID 0000-0001-6209-1380), Moon, Alena (ORCID 0000-0003-0379-294X)

Source: Chemistry Education Research and Practice. Jan 2023 24(1):36-49.

Peer Reviewed: Y

Page Count: 14

Descriptors: Graphs, Data Analysis, Data Interpretation, Science Process Skills, Prior Learning, Protocol Analysis, Chemistry, Science Experiments, College Science, Undergraduate Students, Majors (Students), Nonmajors

Safety and efficacy outcomes of early cessation of anti-PD1 therapy in patients 80 years or older: A retrospective cohort study

Authors: Fletcher, Kylie, Cortellini, Alessio, Ganta, Teja, Kankaria, Roma, Song, Haocan, Ye, Fei, Irlmeier, Rebecca, Debnath, Neha, Saeed, Anwaar, Radford, Maluki, Alahmadi, Asrar, Diamond, Akiva, Hoimes, Christopher, Presley, Carolyn J., Owen, Dwight H., Abou Alaiwi, Sarah, Nassar, Amin H., Lamberti, Giuseppe, Perrone, Fabiana, Buti, Sebastiano, Giusti, Raffaele, Filetti, Marco, Vanella, Vito, Mallardo, Domenico, Sussman, Tamara A., Galetta, Domenico, Kalofonou, Foteini, Daniels, Ella, Ascierto, Paolo A., Pinato, David J., Nebhan, Caroline, Berg, Stephanie, Choueiri, Toni K., Marron, Thomas U., Wang, Yinghong, Naqash, Abdul Rafeh, Johnson, Douglas B.

Source: In Cancer Letters 1 August 2024 596

Detection of Interictal epileptiform discharges with semi-supervised deep learning

Authors: de Sousa, Ana Maria Amaro, van Putten, Michel J.A.M., van den Berg, Stéphanie, Amir Haeri, Maryam

Source: In Biomedical Signal Processing and Control February 2024 88 Part B

Limitations of conventional approaches to identify photochemically produced reactive intermediates involved in contaminant indirect photodegradationElectronic supplementary information (ESI) available: Additional information on materials, kinetics experiments and corresponding HPLC methods, linear regression analysis, and quenching experiments. See DOI: https://doi.org/10.1039/d3em00304c

Authors: Milstead, Reid P., Berg, Stephanie M., Kelly, Bella M., Knellwolf, Christian D., Larson, Cooper J., Wammer, Kristine H., Remucal, Christina K.

Source: Environmental science.Processes & impacts. 25(10):1694-1707

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100196338623.0x000001&indx=1&recIds=ETOCvdc_100196338623.0x000001

EBV-positive PCNSL in older patients: incidence, characteristics, tumor pathology, and outcomes across a large multicenter cohort

Authors: Agrawal, Prashasti, David, Kevin A., Chen, Zhengming, Sundaram, Suchitra, Kim, Seo-Hyun, Vaca, Ryan, Lin, Yong, Singer, Samuel, Malecek, Mary-Kate, Carter, Jordan, Zayac, Adam, Kim, Myung Sun, Reddy, Nishitha, Ney, Douglas, Habib, Alma, Strouse, Christopher, Graber, Jerome, Bachanova, Veronika, Salman, Sidra, Vendiola, Jean A., Hossain, Nasheed, Tsang, Mazie, Major, Ajay, Gandhi, Maher K., Keane, Colm, Bond, David A., Folstad, Matthew, Chang, Julie, Mier-Hicks, Angel, Torka, Pallawi, Rajakumar, Priya, Venugopal, Parameswaran, Berg, Stephanie, Glantz, Michael, Goldlust, Samuel A., Matnani, Rahul, Kumar, Pallavi, Ollila, Thomas A., Cai, Johnny, Spurgeon, Stephen E., Sieg, Alex G., Cleveland, Joseph, Epperla, Narendranath, Karmali, Reem, Naik, Seema, Smith, Sonali M., Rubenstein, James L., Kahl, Brad S., Chadburn, Amy, Evens, Andrew M., Martin, Peter

Source: Leukemia & lymphoma. 64(5):1026-1034

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100190362980.0x000001&indx=1&recIds=ETOCvdc_100190362980.0x000001

Dissolved Organic Matter Photoreactivity Is Determined by Its Optical Properties, Redox Activity, and Molecular Composition

Authors: Berg, Stephanie M., Wammer, Kristine H., Remucal, Christina K.

Source: Environmental science & technology. 57(16):6703-6711

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN632535100&indx=1&recIds=ETOCRN632535100

Older patients with primary central nervous system lymphoma: Survival and prognostication across 20 U.S. cancer centers

Authors: David, Kevin A., Sundaram, Suchitra, Kim, Seo‐Hyun, Vaca, Ryan, Lin, Yong, Singer, Samuel, Malecek, Mary‐Kate, Carter, Jordan, Zayac, Adam, Kim, Myung Sun, Reddy, Nishitha, Ney, Douglas, Habib, Alma, Strouse, Christopher, Graber, Jerome, Bachanova, Veronika, Salman, Sidra, Vendiola, Jean Alyxa, Hossain, Nasheed, Tsang, Mazie, Major, Ajay, Bond, David A., Agrawal, Prashasti, Mier‐Hicks, Angel, Torka, Pallawi, Rajakumar, Priya, Venugopal, Parameswaran, Berg, Stephanie, Glantz, Michael, Goldlust, Samuel A., Folstad, Matthew, Kumar, Pallavi, Ollila, Thomas A., Cai, Johnny, Spurgeon, Stephen, Sieg, Alex, Cleveland, Joseph, Chang, Julie, Epperla, Narendranath, Karmali, Reem, Naik, Seema, Martin, Peter, Smith, Sonali M., Rubenstein, James, Kahl, Brad, Evens, Andrew M.

Source: American journal of hematology. 98(6):900-912

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100182458053.0x000001&indx=1&recIds=ETOCvdc_100182458053.0x000001

Outcomes of Consolidative Nephrectomy following Primary Immunotherapy in Advanced Renal Cell Carcinoma: A Multicenter Analysis

Authors: Hakimi, Kevin, Saidian, Ava, Panian, Justine, Barata, Pedro, Berg, Stephanie, Chang, Steven L., Saliby, Renee M., Dzimitrowicz, Hannah, Emamekhoo, Hamid, Gross, Evan, Kilari, Deepak, Lam, Elaine, Nguyen, Mimi, Meagher, Margaret, Wang, Luke, Rauterkus, Grant P., D'Andrea, Vincent, Yim, Kendrick, Psutka, Sarah, Thapa, Bicky, Weise, Nicole, Zhang, Tian, McKay, Rana R., Derweesh, Ithaar H.

Source: In Clinical Genitourinary Cancer December 2023 21(6):694-702

First-Line Treatment for Intermediate and Poor Risk Advanced or Metastatic Clear Cell Renal Cell Carcinoma

Authors: Serzan, Michael T., Xu, Wenxin, Berg, Stephanie A.

Source: In Hematology/Oncology Clinics of North America October 2023 37(5):951-964

Prompting Hypothetical Social Comparisons to Support Chemistry Students' Data Analysis and Interpretations

Authors: Berg, Stephanie A. (ORCID 0000-0001-6209-1380), Moon, Alena (ORCID 0000-0003-0379-294X)

Source: Chemistry Education Research and Practice. Jan 2022 23(1):124-136.

Peer Reviewed: Y

Page Count: 13

Descriptors: Chemistry, Science Instruction, Self Evaluation (Individuals), Feedback (Response), Comparative Analysis, Peer Evaluation, Student Attitudes, Data Analysis, Data Interpretation, Undergraduate Students, Interviews, Cognitive Processes, Student Improvement

Breakthrough SARS-CoV-2 infections among patients with cancer following two and three doses of COVID-19 mRNA vaccines: a retrospective observational study from the COVID-19 and Cancer Consortium

Authors: Choueiri, Toni K., Labaki, Chris, Bakouny, Ziad, Hsu, Chih-Yuan, Schmidt, Andrew L., de Lima Lopes, Gilberto, Jr., Hwang, Clara, Singh, Sunny R.K., Jani, Chinmay, Weissmann, Lisa B., Griffiths, Elizabeth A., Halabi, Susan, Wu, Ulysses, Berg, Stephanie, O'Connor, Timothy E., Wise-Draper, Trisha M., Panagiotou, Orestis A., Klein, Elizabeth J., Joshi, Monika, Yared, Fares, Dutra, Miriam Santos, Gatson, Na Tosha N., Blau, Sibel, Singh, Harpreet, Nanchal, Rahul, McKay, Rana R., Nonato, Taylor K., Quinn, Ryann, Rubinstein, Samuel M., Puc, Matthew, Mavromatis, Blanche H., Vikas, Praveen, Faller, Bryan, Zaren, Howard A., Del Prete, Salvatore, Russell, Karen, Reuben, Daniel Y., Accordino, Melissa K., Friese, Christopher R., Mishra, Sanjay, Rivera, Donna R., Shyr, Yu, Farmakiotis, Dimitrios, Warner, Jeremy L.

Source: In The Lancet Regional Health - Americas March 2023 19

Automated Assessment of and Feedback on Concept Maps During Inquiry Learning

Authors: Kroeze, Karel A. (ORCID 0000-0002-7000-7377), van den Berg, Stephanie M., Veldkamp, Bernard P., de Jong, Ton (ORCID 0000-0003-0416-4304)

Source: IEEE Transactions on Learning Technologies. Aug 2021 14(4):460-473.

Peer Reviewed: Y

Page Count: 14

Descriptors: Feedback (Response), Concept Mapping, Student Evaluation, Teaching Methods, Evaluation Methods, Inquiry, Active Learning, Computer Assisted Instruction

Structural racism is a mediator of disparities in acute myeloid leukemia outcomes

Authors: Abraham, Ivy Elizabeth, Rauscher, Garth H., Patel, Anand Ashwin, Pearse, William B., Rajakumar, Priya, Burkart, Madelyn, Aleem, Ahmed, Dave, Ami, Bharadwaj, Sushma, Paydary, Koosha, Acevedo-Mendez, Maria, Goparaju, Krishna, Gomez, Richard, Carlson, Kylie, Tsai, Stephanie B., Quigley, John G., Galvin, John P., Zia, Maryam, Larson, Melissa L., Berg, Stephanie, Stock, Wendy, Altman, Jessica K., Khan, Irum

Source: Blood. 139(14):2212-2226

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100183255990.0x000001&indx=1&recIds=ETOCvdc_100183255990.0x000001

COVID‐19 thromboembolism incidence, risk factors, and anticoagulation practices from a Chicago metropolitan US population

Authors: Berg, Stephanie, Kim, Seo‐Hyun, Wozniak, Amy, Odetola, Oluwatobi, Arain, Saad, Aleem, Ahmed, Coggan, James, Dave, Ami, Elliott, Elizabeth, Guerrettaz, Ryan, Dalal, Hina, Lee, Raymond, Kodali, Abhigna, Moore, Patrick, Patel, Sonam, Rajakumar, Priya, Qin, Shuai, Delgado Ramos, Glenda, Schwartz, Candice, Esmail, Fatema, Feltman Frank, Rebecca, Murchie, Ellen, Pax, Laura, Yun, Nicole, Zhang, Yanyu, Barton, Kevin, Hagen, Patrick, Hossain, Nasheed, Larson, Melissa L., Mai, Hanh, Nand, Sucha, Phelan, Kathleen, Venugopal, Parameswawran, Stiff, Patrick, Saraf, Santosh

Source: American journal of hematology. 97(6):E217-E220

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100182458051.0x000001&indx=1&recIds=ETOCvdc_100182458051.0x000001

The molecular mechanism and challenge of targeting XPO1 in treatment of relapsed and refractory myeloma

Authors: Sellin, Mark, Berg, Stephanie, Hagen, Patrick, Zhang, Jiwang

Source: In Translational Oncology August 2022 22

A phase III randomized trial of eribulin (E) with gemcitabine vs standard of care (SOC) for patients (pts) with metastatic urothelial carcinoma (mUC) refractory to or ineligible for PD/PDL1 antibody (Ab): SWOG S1937—Updated design.

Authors: Sadeghi, Sarmad, Callis, Samuel, Lara Jr., Primo N, Berg, Stephanie A., Brown, Jason Robert, Bangs, Rick, Nakagawa, Darrell, Daneshmand, Siamak, Ian Murchie, Thompson, Thomas W., Petrylak, Daniel P., Lerner, Seth P.

Source: Journal of Clinical Oncology; 2/20/2025 Supplement 5, Vol. 43, pTPS887-TPS887, 242p

Hypercoagulability of COVID-19 and Neurological Complications: A Review

Authors: Moore, Patrick, Esmail, Fatema, Qin, Shuai, Nand, Sucha, Berg, Stephanie

Source: In Journal of Stroke and Cerebrovascular Diseases January 2022 31(1)