CTCF modulates allele-specific sub-TAD organization and imprinted gene activity at the mouse Dlk1-Dio3 and Igf2-H19 domains

Authors: David Llères, Benoît Moindrot, Rakesh Pathak, Vincent Piras, Mélody Matelot, Benoît Pignard, Alice Marchand, Mallory Poncelet, Aurélien Perrin, Virgile Tellier, Robert Feil, Daan Noordermeer

Source: Genome Biology, Vol 20, Iss 1, Pp 1-17 (2019)

Subject Terms: Genomic imprinting, 3D genome organization, Dlk1, Meg3, Igf2, CTCF, Biology (General), QH301-705.5, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1474-760X

Access URL: https://doaj.org/article/6246306ae90347bbb877362b3c3099bb

The Drosophila Fab-7 boundary modulates Abd-B gene activity by guiding an inversion of collinear chromatin organization and alternate promoter use

Authors: Laura Moniot-Perron, Benoit Moindrot, Line Manceau, Joanne Edouard, Yan Jaszczyszyn, Pascale Gilardi-Hebenstreit, Céline Hernandez, Sébastien Bloyer, Daan Noordermeer

Source: Cell Reports, Vol 42, Iss 1, Pp 111967- (2023)

Subject Terms: CP: Molecular biology, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S221112472201871X; https://doaj.org/toc/2211-1247

Access URL: https://doaj.org/article/cf271bec9cdb40d08006da377b3f33ef

Open for connections: HiCAR reveals the interactions of accessible DNA

Authors: Benoit Moindrot, Daan Noordermeer

Source: Cell Genomics, Vol 2, Iss 4, Pp 100121- (2022)

Subject Terms: Genetics, QH426-470, Internal medicine, RC31-1245

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2666979X22000453; https://doaj.org/toc/2666-979X

Access URL: https://doaj.org/article/eb631b2aa29840d3bc22155bb703a2c5

Systematic allelic analysis defines the interplay of key pathways in X chromosome inactivation

Authors: Tatyana B. Nesterova, Guifeng Wei, Heather Coker, Greta Pintacuda, Joseph S. Bowness, Tianyi Zhang, Mafalda Almeida, Bianca Bloechl, Benoit Moindrot, Emma J. Carter, Ines Alvarez Rodrigo, Qi Pan, Ying Bi, Chun-Xiao Song, Neil Brockdorff

Source: Nature Communications, Vol 10, Iss 1, Pp 1-15 (2019)

Subject Terms: Science

File Description: electronic resource

Relation: https://doaj.org/toc/2041-1723

Access URL: https://doaj.org/article/1099fcaec9864035a2a87b2701f1ba55

The role of the Xist 5’ m6A region and RBM15 in X chromosome inactivation [version 1; peer review: 1 approved, 2 approved with reservations]

Authors: Heather Coker, Guifeng Wei, Benoit Moindrot, Shabaz Mohammed, Tatyana Nesterova, Neil Brockdorff

Source: Wellcome Open Research, Vol 5 (2020)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://wellcomeopenresearch.org/articles/5-31/v1; https://doaj.org/toc/2398-502X

Access URL: https://doaj.org/article/b298b9adf43348348402ac34948230ba

A Pooled shRNA Screen Identifies Rbm15, Spen, and Wtap as Factors Required for Xist RNA-Mediated Silencing

Authors: Benoit Moindrot, Andrea Cerase, Heather Coker, Osamu Masui, Anne Grijzenhout, Greta Pintacuda, Lothar Schermelleh, Tatyana B. Nesterova, Neil Brockdorff

Source: Cell Reports, Vol 12, Iss 4, Pp 562-572 (2015)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2211124715006798; https://doaj.org/toc/2211-1247

Access URL: https://doaj.org/article/1128f7ecf32f4264b63b383ff7c04811

Replication fork polarity gradients revealed by megabase-sized U-shaped replication timing domains in human cell lines.

Authors: Antoine Baker, Benjamin Audit, Chun-Long Chen, Benoit Moindrot, Antoine Leleu, Guillaume Guilbaud, Aurélien Rappailles, Cédric Vaillant, Arach Goldar, Fabien Mongelard, Yves d'Aubenton-Carafa, Olivier Hyrien, Claude Thermes, Alain Arneodo

Source: PLoS Computational Biology, Vol 8, Iss 4, p e1002443 (2012)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3320577?pdf=render; https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

Access URL: https://doaj.org/article/7d11a983c8a84058b54c32765c749815