Molecular Mechanics Demonstrate S-COMT as promising therapeutic receptor when analyzed with secondary plant metabolites

Authors: Garg, Deepanshu, Vashishth, Aarya, Jayawant, Maharsh Jayadeep, Bastikar, Virupaksha A.

Source: In Journal of the Indian Chemical Society November 2024 101(11)

Integrative epigenome-transcriptome analysis unravels cancer-specific over-expressed genes potentially regulating immune microenvironment in clear cell renal cell carcinoma

Authors: Gadewal, Nikhil, Natu, Abhiram, Sen, Siddhartha, Rauniyar, Sukanya, Bastikar, Virupaksha, Gupta, Sanjay

Source: In BBA - General Subjects May 2024 1868(5)

Potential inhibitory activity of phytoconstituents against black fungus: In silico ADMET, molecular docking and MD simulation studies

Authors: Hamaamin Hussen, Narmin, Hameed Hasan, Aso, Jamalis, Joazaizulfazli, Shakya, Sonam, Chander, Subhash, Kharkwal, Harsha, Murugesan, Sankaranaryanan, Ajit Bastikar, Virupaksha, Pyarelal Gupta, Pramodkumar

Source: In Computational Toxicology November 2022 24

Conformational Transitions in EGFR Protein Tyrosine Kinase Domain and Their Modulation by Mutants.

Authors: Shaikh, Eshrat, Talati, Varun, Garg, Deepanshu, Baruah, Ashay, Joshi, Priyanka, Bastikar, Virupaksha

Source: Proceedings of the National Academy of Sciences, India Section B; Mar2025, Vol. 95 Issue 1, p61-73, 13p

Characterization of Human-malarial Parasite Species based on DHFR and GST Targets Resulting in Changes in Anti-malarial Drug Binding Conformations

Authors: Sakpal, Shrutika, Kothari, Shanker Lal, Bastikar, Virupaksha

Source: Drug metabolism and bioanalysis letters. 15(1):22-37

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100189020541.0x000001&indx=1&recIds=ETOCvdc_100189020541.0x000001

In silico analysis of the pyretic effect of drugs on antimalarial receptors

Authors: Sakpal, Shrutika, Bastikar, Alpana, Kothari, Shanker Lal, Bastikar, Virupaksha

Source: In Journal of the Indian Chemical Society September 2021 98(9)

Target related in silico analysis of Bergenin and tuberculosis management

Authors: Bastikar, Virupaksha A., Bastikar, Alpana, Gupta, Pramodkumar P., Sandeep, R., Pat, Chhajed, Santosh S.

Source: Biomedicine. 40(4):474-481

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN627245245&indx=1&recIds=ETOCRN627245245

Chapter 11 - Bioinformatics serving oncoviral studies

Authors: Bastikar, Virupaksha Ajit, Gupta, Pramodkumar Pyarelal, Bastikar, Alpana, Chhajed, Santosh Subhash, Bothe, Santosh Ajabrao

Source: In Oncogenic Viruses 2023:253-266

Chapter 14 - Hepatitis C virus and hepatocellular carcinoma

Authors: Gupta, Pramodkumar Pyarelal, Sadrani, Viraj Jitendra, Gupta, Priyanshu Pramodkumar, Parab, Mala Makarand, Bastikar, Virupaksha Ajit

Source: In Oncogenic Viruses 2023:243-262

Chapter 10 - Quantitative structure–activity relationship-based computational approaches

Authors: Bastikar, Virupaksha, Bastikar, Alpana, Gupta, Pramodkumar

Source: In Computational Approaches for Novel Therapeutic and Diagnostic Designing to Mitigate SARS-CoV-2 Infection 2022:191-205

STRUCTURAL VARIATION AND TRANSITIONAL ANALYSIS OF EMBB RECEPTOR WITH ITS MUTANTS LEADING TO DRUG RESISTANCE IN TUBERCULOSIS.

Authors: KARN, VAMIKA, TALATI, VARUN P., KAMBLE, SHASHANK S., BASTIKAR, VIRUPAKSHA A.

Source: Asian Journal of Microbiology, Biotechnology & Environmental Sciences; 2023, Vol. 25 Issue 3, p484-490, 7p

Chapter 5 - Biological Databases in Virology

Authors: Gupta, Pramodkumar Pyarelal, Bastikar, Virupaksha Ajit, Chhajed, Santosh Subhash, Kothari, Shanker Lal

Source: In Emerging and Reemerging Viral Pathogens 2020:57-70

List of contributors

Authors: Aboulmouhajir, Aziz, Ahmed, Sheik S.S.J., Alexandrova, Radostina, Anouar Tadlaoui, Kaoutar, Arga, Kazim Yalcin, Barrijal, Said, Baskar, Mahalakshmi, Bastikar, Alpana, Bastikar, Virupaksha Ajit, Bazir, Hanaâ, Benchekroun, Mohammed Nabil, Bennani, Bahia, Bessi, Hlima, Bhaskar Kalarani, Iyshwarya, Bothe, Santosh Ajabrao, Bouchikhi, Benachir, Byadi, Said, Chhajed, Santosh Subhash, Diouf, Alassane, El Bari, Nezha, El Battioui, Fadoua, El Malki, Fatima, Ennaji, Moulay Mustapha, Ghazal, Hassan, Gupta, Pramodkumar Pyarelal, Hassou, Najwa, Kaviarasan, Vaishak, Kori, Medi, Labyed, Marwah, Motia, Soukaina, Mzibri, Mohammed El, Panwar, Harsh, Podlipnik, Črtomir, Pramasivam, Prabu, Ragunath, Barath, Salma, Elamrani Elhassani, Saravanan, ChandraLekha, Sudhan, Mookkandi, Thasneem, Kamila, Veerabathiran, Ramakrishnan

Source: In Oncogenic Viruses 2023:xv-xviii

List of contributors

Authors: Abena, Ange Antoine, Aboulalaa, Kawtar, Abumsimir, Berjas, Ahmed, Sheik S.S.J., Almahasneh, Ihsan, Arumugam, Sembiyaa, Assoumou, Samira Zoa, Barath, Ragunath, Bastikar, Virupaksha Ajit, Bazir, Hanaâ, Benchekroun, Mohammed Nabil, Bessi, Hlima, Boumba, Anicet, Boussettine, Rihabe, Chehab, Farid, El Mzibri, Mohammed, Ennaji, Moulay Mustapha, Ennaji, Youssef, Erguibi, Driss, Filali-Ansari, Najoie, Gupta, Pramodkumar Pyarelal, Gupta, Priyanshu Pramodkumar, Hammou, Rahma Ait, Hassou, Najwa, Hatib, Abderrahim, Ibara, Jean-Rosaire, Jroundi, Chaymae, Kasmi, Yassine, koita, Moussa, Kombe, Arnaud Kombe, Laraqui, Abdelilah, Loubano-Voumbi, Ghislain, Malonga, Gervillien Arnold, Massamba, Bienvenu Lebwaze, Mayakia, Patrina Joseph Iloukou, Mbenza, Longo, Mokondjimobe, Etienne, Moukassa, Donatien, Nabil, Said Abdallah, Ngombe Mouabata, Dorine Florence Luthera, Parab, Mala Makarand, Parode, Ragive Takale, Raja, Keerthana, Ranjith, B., Rihane, Fatima Ezzahra, Sadkaoui, Meryem, Sadrani, Viraj Jitendra, Saif, Imane, Sandeep, S., Sosse, Soukayna Alaoui, Souhou, Tiatou, Takati, Nadia, Tiabi, Ikram, Tshimpi, Antoine, Vaishak, Kaviarasan, Veerabathiran, Ramakrishnan, Zoure, Abdou Azaque

Source: In Oncogenic Viruses 2023:xvii-xxii

List of contributors

Authors: Agnihotri, Rupal, Akkiraju, Lakshmi Jayasri, Anbarasan, T., Artiga-Sainz, Laura Margarita, Babu, Dinesh, Badwaik, Hemant Ramachandra, Bajare, Nikitha, Banerjee, Sugato, Baptiste, Mahaly, Basha, S. Nisar, Bastikar, Alpana, Bastikar, Virupaksha, Basu, Amitava, Bathula, Sreenivas Reddy, Bilbao, Juan Sánchez-Verde, Biswas, Debasis, Boro, Hankhray, Chowdhury, Rakhi, David, Anjlina, Devaraj, V.R., Ehsan, Hashimul, Garg, Tripta, Goel, Purvi, Goyal, Abhishek, Goyal, Arvind Kumar, Gupta, Pramodkumar, Gupta, Sayan Dutta, Gupta, Sudheer, Haldar, Shoumi, Hazra, Subhajit, Ibáñez-Navarro, Adrián, Kaneko, Gen, Khan, Raju, Khare, Prashant, Krishnamurthy, Anand, Kumar, Ashok, Kumar, Avinash, Kumar, Sanjeev, Kumari, Leena, Kumari, Ravita, Lepakshi, Vijayalakshmi A., Malviya, Shivani, Mathew, Bijina J., Merchant, Alisha, Middha, Sushil Kumar, Milesh, Ligi, Morante-Ruiz, Miguel, Nandy, Madhurima, Nema, Ram Kumar, Pan, Cheol-Ho, Panda, Prachurjya, Panda, Subhamay, Panda, Udwesh, Pandita, Vasundhara, Pareek, Charu, Parihar, Arpana, Parihar, Dipesh Singh, Prasad, Sonal, Qidwai, Tabish, Quintana-Díaz, Manuel, Ramesh Reddy, K., Ranjan, Pushpesh, Rodríguez de Lema-Tapetado, Guido, Sadique, Mohd. Abubakar, Sahu, Gaurav, Saluja, Rohit, Samanta, Amalendu, Santana, Marcos V.S., Sarria-Santamera, Antonio, Satyanarayana, S.V., Shanmugarajan, Dhivya, Siddhardha, Busi, Silva-Jr, Floriano P., Sindhuja, Tulasi, Singh, Anirudh K., Singh, Himadri, Singh, Namami, Song, Dae-Geun, Srivastava, Aashna, Subhaswaraj, Pattnaik, Sucharitha, P., Sukhralia, Shivani, Tania, Vidal H., Tasneem, Javeriya, Usha, Talambedu, Vyas, Ashish Kumar, Yadav, Neelam, Yadav, Ritu, Yadav, Shalu

Source: In Computational Approaches for Novel Therapeutic and Diagnostic Designing to Mitigate SARS-CoV-2 Infection 2022:xv-xviii

INSILICO DESIGN AND QSAR ANALYSIS OF 2, 5- DIHYDROXY-3-UNDECYL-1, 4-BENZOQUINONE SCAFFOLD.

Authors: Gupta, Pramodkumar P.¹, Bastikar, Virupaksha A.¹, Patil, Sonal V.¹

Source: Advances in Pharmacology & Toxicology. Aug2011, Vol. 12 Issue 2, p85-94. 10p.

Subject Terms: *QSAR models, *PHARMACODYNAMICS, *PHYTOCHEMICALS, *NONSTEROIDAL anti-inflammatory agents, *BENZOQUINONES

Molecular modeling and structure-based drug discovery approach reveals protein kinases as off-targets for novel anticancer drug RH1.

Authors: Gupta, Pramodkumar, Bastikar, Virupaksha, Kuciauskas, Dalius, Kothari, Shanker, Cicenas, Jonas, Valius, Mindaugas, Gupta, Pramodkumar P, Bastikar, Virupaksha A, Kothari, Shanker Lal

Source: Medical Oncology; Oct2017, Vol. 34 Issue 10, p1-9, 9p

List of Contributors

Authors: Allali, Karam, Amraouza, Yassine, Amzazi, Saaid, Arrías, Paula N., Bastikar, Virupaksha Ajit, Benhassou, Mustapha, Bessi, Hlima, Calamante, Gabriela, Chhajed, Santosh Subhash, Dapiaggi, Federico, Del Médico Zajac, María Paula, El Mallali, Yassine, El Mzibri, Mohammed, El-Aliani, Aissam, Ennaji, Moulay Mustapha, Ennaji, Youssef, Fabre, M. Laura, Garanzini, Débora, Gupta, Pramodkumar Pyarelal, Hafid, Jamal, Hammou, Rahma Ait, Hattaf, Khalid, Kasmi, Yassine, Khataby, Khadija, Kothari, Shanker Lal, Lamsisi, Maryame, Loutfi, Chafiqa, Masson, Tomás, Mohiuddin, Mahi M., Pérez, Oscar Ramón, Pidre, Matías L., Pieraccini, Stefano, Podlipnik, Črtomir, Potenza, Donatella, Romanowski, Víctor, Sami, Darkaoui, Schellhorn, Herb E., Souiri, Amal, Vasile, Francesca, Yousfi, Noura, Zemzami, Mustapha

Source: In Emerging and Reemerging Viral Pathogens 2020:xiii-xv

Synthesis and molecular modeling studies of 3-chloro-4-substituted-1-(8-hydroxy-quinolin-5-yl)-azetidin-2-ones as novel anti-filarial agents

Authors: Chhajed, Santosh S., Manisha, Puranik, Bastikar, Virupaksha A., Animeshchandra, Haldar, Ingle, V.N., Upasani, Chandrashekhar D., Wazalwar, Sachin S.

Source: In Bioorganic & Medicinal Chemistry Letters 15 June 2010 20(12):3640-3644

Potential inhibitory activity of phytoconstituents against black fungus: In silicoADMET, molecular docking and MD simulation studies

Authors: Hamaamin Hussen, Narmin, Hameed Hasan, Aso, Jamalis, Joazaizulfazli, Shakya, Sonam, Chander, Subhash, Kharkwal, Harsha, Murugesan, Sankaranaryanan, Ajit Bastikar, Virupaksha, Pyarelal Gupta, Pramodkumar

Source: Computational Toxicology; November 2022, Vol. 24 Issue: 1