Parallelized computational 3D video microscopy of freely moving organisms at multiple gigapixels per second

Authors: Zhou, Kevin C., Harfouche, Mark, Cooke, Colin L., Park, Jaehee, Konda, Pavan C., Kreiss, Lucas, Kim, Kanghyun, Jönsson, Joakim, Doman, Jed, Reamey, Paul, Saliu, Veton, Cook, Clare B., Zheng, Maxwell, Bechtel, Jack P., Bègue, Aurélien, McCarroll, Matthew, Bagwell, Jennifer, Horstmeyer, Gregor, Bagnat, Michel, Horstmeyer, Roarke

Subject Terms: Physics - Optics, Electrical Engineering and Systems Science - Image and Video Processing, Physics - Biological Physics

Access URL: http://arxiv.org/abs/2301.08351

Notochord segmentation in zebrafish controlled by iterative mechanical signaling

Authors: Wopat, Susan, Adhyapok, Priyom, Daga, Bijoy, Crawford, Janice M., Norman, James, Bagwell, Jennifer, Peskin, Brianna, Magre, Indrasen, Fogerson, Stephanie M., Levic, Daniel S., Di Talia, Stefano, Kiehart, Daniel P., Charbonneau, Patrick, Bagnat, Michel

Source: In Developmental Cell 22 July 2024 59(14):1860-1875

TNF Promoter Hypomethylation Is Associated With Mucosal Inflammation in IBD and Anti-TNF Response

Authors: Levic, Daniel S., Niedzwiecki, Donna, Kandakatla, Apoorva, Karlovich, Norah S., Juneja, Arjun, Park, Jieun, Stolarchuk, Christina, Adams, Shanté, Willer, Jason R., Schaner, Matthew R., Lian, Grace, Beasley, Caroline, Marjoram, Lindsay, Flynn, Ann D., Valentine, John F., Onken, Jane E., Sheikh, Shehzad Z., Davis, Erica E., Evason, Kimberley J., Garman, Katherine S., Bagnat, Michel

Source: In Gastro Hep Advances 2024 3(7):888-898

Polarized transport of membrane and secreted proteins during lumen morphogenesis

Authors: Levic, Daniel S., Bagnat, Michel

Source: Seminars in cell & developmental biology. 133:65-73

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100175812861.0x000001&indx=1&recIds=ETOCvdc_100175812861.0x000001

Self‐organization of apical membrane protein sorting in epithelial cells

Authors: Levic, Daniel S., Bagnat, Michel

Source: FEBS journal. 289(3):659-670

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100139822114.0x000001&indx=1&recIds=ETOCvdc_100139822114.0x000001

Rediscovering the rete ovarii, a secreting auxiliary structure to the ovary.

Authors: Anbarci, Dilara N., McKey, Jennifer, Levic, Daniel S., Bagnat, Michel, Capel, Blanche

Source: eLife; 3/19/2025, p1-19, 19p

Protein absorption in the zebrafish gut is regulated by interactions between lysosome rich enterocytes and the microbiome.

Authors: Childers, Laura, Jieun Park, Siyao Wang, Liu, Richard, Barry, Robert, Watts, Stephen A., Rawls, John F., Bagnat, Michel

Source: eLife; 3/13/2025, p1-29, 29p

Smoothelin-like 2 Inhibits Coronin-1B to Stabilize the Apical Actin Cortex during Epithelial Morphogenesis

Authors: Hachimi, Mariam, Grabowski, Catalina, Campanario, Silvia, Herranz, Gonzalo, Baonza, Gabriel, Serrador, Juan M., Gomez-Lopez, Sergio, Barea, Maria D., Bosch-Fortea, Minerva, Gilmour, Darren, Bagnat, Michel, Rodriguez-Fraticelli, Alejo E., Martin-Belmonte, Fernando

Source: In Current Biology 22 February 2021 31(4):696-706

Notochordal Signals Establish Phylogenetic Identity of the Teleost Spine

Authors: Peskin, Brianna, Henke, Katrin, Cumplido, Nicolás, Treaster, Stephen, Harris, Matthew P., Bagnat, Michel, Arratia, Gloria

Source: In Current Biology 20 July 2020 30(14):2805-2814

Dynamic BMP signaling mediates notochord segmentation in zebrafish

Authors: Peskin, Brianna, Norman, James, Bagwell, Jennifer, Lin, Adam, Adhyapok, Priyom, Di Talia, Stefano, Bagnat, Michel

Source: Current biology. 33(12):2574-2581.e3

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100193460533.0x000001&indx=1&recIds=ETOCvdc_100193460533.0x000001

Lysosome-Rich Enterocytes Mediate Protein Absorption in the Vertebrate Gut

Authors: Park, Jieun, Levic, Daniel S., Sumigray, Kaelyn D., Bagwell, Jennifer, Eroglu, Oznur, Block, Carina L., Eroglu, Cagla, Barry, Robert, Lickwar, Colin R., Rawls, John F., Watts, Stephen A., Lechler, Terry, Bagnat, Michel

Source: In Developmental Cell 7 October 2019 51(1):7-20

Tissue self-organization underlies morphogenesis of the notochord

Authors: Norman, James, Sorrell, Emma L., Hu, Yi, Siripurapu, Vaishnavi, Garcia, Jamie, Bagwell, Jennifer, Charbonneau, Patrick, Lubkin, Sharon R., Bagnat, Michel

Source: Philosophical Transactions: Biological Sciences, 2018 Nov 01. 373(1759), 1-13.

Access URL: https://www.jstor.org/stable/26507078

Spine Patterning Is Guided by Segmentation of the Notochord Sheath

Authors: Wopat, Susan, Bagwell, Jennifer, Sumigray, Kaelyn D., Dickson, Amy L., Huitema, Leonie F.A., Poss, Kenneth D., Schulte-Merker, Stefan, Bagnat, Michel

Source: In Cell Reports 20 February 2018 22(8):2026-2038

Plasma Membrane Polarization during Mating in Yeast Cells

Authors: Bagnat, Michel, Gaus, Katharina, Simons, Kai

Source: The Journal of Cell Biology, 2006 Jun . 173(6), 861-866.

Access URL: https://www.jstor.org/stable/4151968

A Genome-Wide Visual Screen Reveals a Role for Sphingolipids and Ergosterol in Cell Surface Delivery in Yeast

Authors: Wagner, Jan, Bagnat, Michel, Simons, Kai, Walch-Solimena, Christiane

Source: Proceedings of the National Academy of Sciences of the United States of America, 2005 Dec . 102(50), 17981-17986.

Access URL: https://www.jstor.org/stable/4152714

Bleb Expansion in Migrating Cells Depends on Supply of Membrane from Cell Surface Invaginations

Authors: Goudarzi, Mohammad, Tarbashevich, Katsiaryna, Mildner, Karina, Begemann, Isabell, Garcia, Jamie, Paksa, Azadeh, Reichman-Fried, Michal, Mahabaleshwar, Harsha, Blaser, Heiko, Hartwig, Johannes, Zeuschner, Dagmar, Galic, Milos, Bagnat, Michel, Betz, Timo, Raz, Erez

Source: In Developmental Cell 4 December 2017 43(5):577-587

Cell Surface Polarization during Yeast Mating

Authors: Bagnat, Michel, Simons, Kai

Source: Proceedings of the National Academy of Sciences of the United States of America, 2002 Oct . 99(22), 14183-14188.

Access URL: https://www.jstor.org/stable/3073560

Lipid Rafts Function in Biosynthetic Delivery of Proteins to the Cell Surface in Yeast

Authors: Bagnat, Michel, Keranen, Sirkka, Shevchenko, Anna, Shevchenko, Andrej, Simons, Kai

Source: Proceedings of the National Academy of Sciences of the United States of America, 2000 Mar . 97(7), 3254-3259.

Access URL: https://www.jstor.org/stable/121878

Developing pressures: fluid forces driving morphogenesis

Authors: Navis, Adam, Bagnat, Michel

Source: In Current Opinion in Genetics & Development June 2015 32:24-30

Loss of cftr function leads to pancreatic destruction in larval zebrafish

Authors: Navis, Adam, Bagnat, Michel

Source: In Developmental Biology 15 March 2015 399(2):237-248