From Night to Light: Harmony as Allegory in Die Zauberflöte

Authors: Baez-Ortega, Adrian

Source: Journal of Austrian Studies. 56(3):1-33

Availability: https://muse.jhu.edu/article/906957

Searching for transmissible cancers among the mussels of Europe

Authors: Baez‐Ortega, Adrian, Murchison, Elizabeth P.

Source: Molecular ecology. 31(3):719-722

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100147500407.0x000001&indx=1&recIds=ETOCvdc_100147500407.0x000001

Somatic evolution and global expansion of an ancient transmissible cancer lineage

Authors: Baez-Ortega, Adrian

Source: Science, 2019 Aug 01. 365(6452), 464-464.

Access URL: https://www.jstor.org/stable/26762326

Computational approaches for discovery of mutational signatures in cancer

Authors: Baez-Ortega, Adrian, Gori, Kevin

Source: Briefings in bioinformatics. 20(1):77-88

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN620631071&indx=1&recIds=ETOCRN620631071

Bacterial salivary microbiome associates with asthma among african american children and young adults

Authors: Espuela‐Ortiz, Antonio, Lorenzo‐Diaz, Fabian, Baez‐Ortega, Adrian, Eng, Celeste, Hernandez‐Pacheco, Natalia, Oh, Sam S., Lenoir, Michael, Burchard, Esteban G., Flores, Carlos, Pino‐Yanes, Maria

Source: Pediatric pulmonology. 54(12):1948-1956

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100092837258.0x000001&indx=1&recIds=ETOCvdc_100092837258.0x000001

Sex disparity in oronasal presentations of canine transmissible venereal tumour

Authors: Strakova, Andrea, Baez‐Ortega, Adrian, Wang, Jinhong, Murchison, Elizabeth P.

Source: Veterinary record. 191(5)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100160465221.0x000001&indx=1&recIds=ETOCvdc_100160465221.0x000001

Generation of universal low-immunogenic human cholangiocyte organoids for treatment of cholangiopathies

Authors: Petrus-Reurer, Sandra, Baez-Ortega, Adrian, Martincorena, Inigo, Saeb-Parsy, Kourosh

Source: Journal of hepatology. 77(S1):S741-S742

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100167265546.0x000001&indx=1&recIds=ETOCvdc_100167265546.0x000001

Recurrent horizontal transfer identifies mitochondrial positive selection in a transmissible cancer

Authors: Strakova, Andrea, Nicholls, Thomas J., Baez-Ortega, Adrian, Ní Leathlobhair, Máire, Sampson, Alexander T., Hughes, Katherine, Bolton, Isobelle A. G., Gori, Kevin, Wang, Jinhong, Airikkala-Otter, Ilona, Allen, Janice L., Allum, Karen M., Arnold, Clara L., Bansse-Issa, Leontine, Bhutia, Thinlay N., Bisson, Jocelyn L., Blank, Kelli, Briceño, Cristóbal, Castillo Domracheva, Artemio, Corrigan, Anne M., Cran, Hugh R., Crawford, Jane T., Cutter, Stephen M., Davis, Eric, de Castro, Karina F., De Nardi, Andrigo B., de Vos, Anna P., Delgadillo Keenan, Laura, Donelan, Edward M., Espinoza Huerta, Adela R., Faramade, Ibikunle A., Fazil, Mohammed, Fotopoulou, Eleni, Fruean, Skye N., Gallardo-Arrieta, Fanny, Glebova, Olga, Gouletsou, Pagona G., Häfelin Manrique, Rodrigo F., Henriques, Joaquim J. G. P., Horta, Rodrigo S., Ignatenko, Natalia, Kane, Yaghouba, King, Cathy, Koenig, Debbie, Krupa, Ada, Kruzeniski, Steven J., Lanza-Perea, Marta, Lazyan, Mihran, Lopez Quintana, Adriana M., Losfelt, Thibault, Marino, Gabriele, Martínez Castañeda, Simón, Martínez-López, Mayra F., Masuruli, Bedan M., Meyer, Michael, Migneco, Edward J., Nakanwagi, Berna, Neal, Karter B., Neunzig, Winifred, Nixon, Sally J., Ortega-Pacheco, Antonio, Pedraza-Ordoñez, Francisco, Peleteiro, Maria C., Polak, Katherine, Pye, Ruth J., Ramirez-Ante, Juan C., Reece, John F., Rojas Gutierrez, Jose, Sadia, Haleema, Schmeling, Sheila K., Shamanova, Olga, Sherlock, Alan G., Steenland-Smit, Audrey E., Svitich, Alla, Tapia Martínez, Lester J., Thoya Ngoka, Ismail, Torres, Cristian G., Tudor, Elizabeth M., van der Wel, Mirjam G., Vițălaru, Bogdan A., Vural, Sevil A., Walkinton, Oliver, Wehrle-Martinez, Alvaro S., Widdowson, Sophie A. E., Zvarich, Irina, Chinnery, Patrick F., Falkenberg, Maria, Gustafsson, Claes M., Murchison, Elizabeth P.

Source: Nature communications. 11(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100174593315.0x000001&indx=1&recIds=ETOCvdc_100174593315.0x000001

The evolution of two transmissible cancers in Tasmanian devils.

Authors: Stammnitz, Maximilian R., Gori, Kevin, Kwon, Young Mi, Harry, Edward, Martin, Fergal J., Billis, Konstantinos, Cheng, Yuanyuan, Baez-Ortega, Adrian, Chow, William, Comte, Sebastien, Eggertsson, Hannes, Fox, Samantha, Hamede, Rodrigo, Jones, Menna, Lazenby, Billie, Peck, Sarah, Pye, Ruth, Quail, Michael A., Swift, Kate, Wang, Jinhong

Source: Science; 4/21/2023, Vol. 380 Issue 6642, p283-293, 11p, 5 Diagrams, 2 Charts, 1 Graph

Evolution and lineage dynamics of a transmissible cancer in Tasmanian devils.

Authors: Kwon, Young Mi¹, Gori, Kevin¹, Park, Naomi², Potts, Nicole¹, Swift, Kate³, Wang, Jinhong¹, Stammnitz, Maximilian R.¹, Cannell, Naomi¹, Baez-Ortega, Adrian¹, Comte, Sebastien^4,5, Fox, Samantha^6,7, Harmsen, Colette³, Huxtable, Stewart⁶, Jones, Menna⁴, Kreiss, Alexandre⁸, Lawrence, Clare⁶, Lazenby, Billie⁶, Peck, Sarah⁶, Pye, Ruth⁸, Woods, Gregory⁸

Source: PLoS Biology; 11/24/2020, Vol. 18 Issue 11, p1-33, 33p, 6 Charts, 3 Graphs

The Origins and Vulnerabilities of Two Transmissible Cancers in Tasmanian Devils

Authors: Stammnitz, Maximilian R., Coorens, Tim H.H., Gori, Kevin C., Hayes, Dane, Fu, Beiyuan, Wang, Jinhong, Martin-Herranz, Daniel E., Alexandrov, Ludmil B., Baez-Ortega, Adrian, Barthorpe, Syd, Beck, Alexandra, Giordano, Francesca, Knowles, Graeme W., Kwon, Young Mi, Hall, George, Price, Stacey, Pye, Ruth J., Tubio, Jose M.C., Siddle, Hannah V.T., Sohal, Sukhwinder Singh, Woods, Gregory M., McDermott, Ultan, Yang, Fengtang, Garnett, Mathew J., Ning, Zemin, Murchison, Elizabeth P.

Source: Cancer cell. 33(4):607-619.e15

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100129322331.0x000001&indx=1&recIds=ETOCvdc_100129322331.0x000001

Somatic mutation rates scale with lifespan across mammals.

Authors: Cagan, Alex, Baez-Ortega, Adrian, Brzozowska, Natalia, Abascal, Federico, Coorens, Tim H. H., Sanders, Mathijs A., Lawson, Andrew R. J., Harvey, Luke M. R., Bhosle, Shriram, Jones, David, Alcantara, Raul E., Butler, Timothy M., Hooks, Yvette, Roberts, Kirsty, Anderson, Elizabeth, Lunn, Sharna, Flach, Edmund, Spiro, Simon, Januszczak, Inez, Wrigglesworth, Ethan

Source: Nature; 4/21/2022, Vol. 604 Issue 7906, p517-524, 8p

SAT165 - Generation of universal low-immunogenic human cholangiocyte organoids for treatment of cholangiopathies

Authors: Petrus-Reurer, Sandra, Baez-Ortega, Adrian, Martincorena, Inigo, Saeb-Parsy, Kourosh

Source: In Journal of Hepatology July 2022 77 Supplement 1:S741-S742

Aberrant integration of Hepatitis B virus DNA promotes major restructuring of human hepatocellular carcinoma genome architecture.

Authors: Álvarez, Eva G., Demeulemeester, Jonas, Otero, Paula, Jolly, Clemency, García-Souto, Daniel, Pequeño-Valtierra, Ana, Zamora, Jorge, Tojo, Marta, Temes, Javier, Baez-Ortega, Adrian, Rodriguez-Martin, Bernardo, Oitaben, Ana, Bruzos, Alicia L., Martínez-Fernández, Mónica, Haase, Kerstin, Zumalave, Sonia, Abal, Rosanna, Rodríguez-Castro, Jorge, Rodriguez-Casanova, Aitor, Diaz-Lagares, Angel

Source: Nature Communications; 11/25/2021, Vol. 12 Issue 1, p1-12, 12p

Subject Terms: HEPATITIS B virus, DNA viruses, HEPATOCELLULAR carcinoma, TUMOR suppressor genes, LIVER cancer

Somatic mutation landscapes at single-molecule resolution.

Authors: Abascal, Federico, Harvey, Luke M. R., Mitchell, Emily, Lawson, Andrew R. J., Lensing, Stefanie V., Ellis, Peter, Russell, Andrew J. C., Alcantara, Raul E., Baez-Ortega, Adrian, Wang, Yichen, Kwa, Eugene Jing, Lee-Six, Henry, Cagan, Alex, Coorens, Tim H. H., Chapman, Michael Spencer, Olafsson, Sigurgeir, Leonard, Steven, Jones, David, Machado, Heather E., Davies, Megan

Source: Nature; 5/20/2021, Vol. 593 Issue 7859, p405-410, 6p

Patterns of somatic structural variation in human cancer genomes.

Authors: Li, Yilong, Roberts, Nicola D., Wala, Jeremiah A., Shapira, Ofer, Schumacher, Steven E., Kumar, Kiran, Khurana, Ekta, Waszak, Sebastian, Korbel, Jan O., Haber, James E., Imielinski, Marcin, PCAWG Structural Variation Working Group, Akdemir, Kadir C., Alvarez, Eva G., Baez-Ortega, Adrian, Beroukhim, Rameen, Boutros, Paul C., Bowtell, David D. L., Brors, Benedikt, Burns, Kathleen H.

Source: Nature; 2/6/2020, Vol. 578 Issue 7793, p112-121, 10p, 1 Diagram, 3 Charts, 16 Graphs

Genomic footprints of activated telomere maintenance mechanisms in cancer.

Authors: Sieverling, Lina, Hong, Chen, Koser, Sandra D., Ginsbach, Philip, Kleinheinz, Kortine, Hutter, Barbara, Braun, Delia M., Cortés-Ciriano, Isidro, Xi, Ruibin, Kabbe, Rolf, Park, Peter J., Eils, Roland, Schlesner, Matthias, PCAWG-Structural Variation Working Group, Akdemir, Kadir C., Alvarez, Eva G., Baez-Ortega, Adrian, Beroukhim, Rameen, Boutros, Paul C., Bowtell, David D. L.

Source: Nature Communications; 2/5/2020, Vol. 11 Issue 1, p1-13, 13p

Subject Terms: TELOMERES, SOMATIC cells, ONCOLOGY, FOOTPRINTS, INSULIN aspart, CANCER, CHROMOSOMES

Whole-Exome Sequencing Identifies Somatic Mutations Associated With Mortality in Metastatic Clear Cell Kidney Carcinoma.

Authors: Mendoza-Alvarez, Alejandro, Guillen-Guio, Beatriz, Baez-Ortega, Adrian, Hernandez-Perez, Carolina, Lakhwani-Lakhwani, Sita, Maeso, Maria-del-Carmen, Lorenzo-Salazar, Jose M., Morales, Manuel, Flores, Carlos

Source: Frontiers in Genetics; 5/15/2019, pN.PAG-N.PAG, 10p

Subject Terms: SOMATIC mutation, RENAL cell carcinoma, CANCER-related mortality, GENETIC drift, DNA microarrays, RENAL cancer

Could lung bacterial dysbiosis predict ICU mortality in patients with extra-pulmonary sepsis? A proof-of-concept study.

Authors: Sepsis Lung Microbiome Study Group, Guillen-Guio, Beatriz, Hernandez-Beeftink, Tamara, Ciuffreda, Laura, Rodríguez-Pérez, Héctor, Domínguez, David, Baez-Ortega, Adrian, Corrales, Almudena, Hernández-Bisshopp, Raúl, Arias, Jorge, Soto, Luis, Camacho, David Viera, González, Gabriela Noemí, Soro, Marina, Espinosa, Elena, Alcoba-Florez, Julia, González-Montelongo, Rafaela, Villar, Jesús, Flores, Carlos

Source: Intensive Care Medicine; Nov2020, Vol. 46 Issue 11, p2118-2120, 3p, 1 Graph

Subject Terms: SEPSIS, SCIENCE education, LUNGS, ACINETOBACTER baumannii

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