Evolution at two levels of gene expression in yeast

Authors: Artieri, Carlo G., Fraser, Hunter B.

Subject Terms: Quantitative Biology - Genomics, Quantitative Biology - Populations and Evolution

Access URL: http://arxiv.org/abs/1311.7140

Transcript length mediates developmental timing of gene expression across Drosophila

Authors: Artieri, Carlo G., Fraser, Hunter B.

Subject Terms: Quantitative Biology - Genomics, Quantitative Biology - Populations and Evolution

Access URL: http://arxiv.org/abs/1301.4516

Association Between Levels of Coding Sequence Divergence and Gene Misregulation in Drosophila Male Hybrids.

Authors: Artieri, Carlo G., Haerty, Wilfried, Singh, Rama S.

Source: Journal of Molecular Evolution; December 2007, Vol. 65 Issue 6, p697-704, 8p

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

Authors: The modeENCODE Consortium, Roy, Sushmita, Ernst, Jason, Kharchenko, Peter V., Kheradpour, Pouya, Negre, Nicolas, Eaton, Matthew L., Landolin, Jane M., Bristow, Christopher A., Ma, Lijia, Lin, Michael F., Washietl, Stefan, Arshinoff, Bradley I., Ay, Ferhat, Meyer, Patrick E., Robine, Nicolas, Washington, Nicole L., Di Stefano, Luisa, Berezikov, Eugene, Brown, Christopher D., Candeias, Rogerio, Carlson, Joseph W., Carr, Adrian, Jungreis, Irwin, Marbach, Daniel, Sealfon, Rachel, Tolstorukov, Michael Y., Will, Sebastian, Alekseyenko, Artyom A., Artieri, Carlo, Booth, Benjamin W., Brooks, Angela N., Dai, Qi, Davis, Carrie A., Duff, Michael O., Feng, Xin, Gorchakov, Andrey A., Gu, Tingting, Henikoff, Jorja G., Kapranov, Philipp, Li, Renhua, MacAlpine, Heather K., Malone, John, Minoda, Aki, Nordman, Jared, Okamura, Katsutomo, Perry, Marc, Powell, Sara K., Riddle, Nicole C., Sakai, Akiko, Samsonova, Anastasia, Sandler, Jeremy E., Schwartz, Yuri B., Sher, Noa, Spokony, Rebecca, Sturgill, David, van Baren, Marijke, Wan, Kenneth H., Yang, Li, Yu, Charles, Feingold, Elise, Good, Peter, Guyer, Mark, Lowdon, Rebecca, Ahmad, Kami, Andrews, Justen, Berger, Bonnie, Brenner, Steven E., Brent, Michael R., Cherbas, Lucy, Elgin, Sarah C. R., Gingeras, Thomas R., Grossman, Robert, Hoskins, Roger A., Kaufman, Thomas C., Kent, William, Kuroda, Mitzi I., Orr-Weaver, Terry, Perrimon, Norbert, Pirrotta, Vincenzo, Posakony, James W., Ren, Bing, Russell, Steven, Cherbas, Peter, Graveley, Brenton R., Lewis, Suzanna, Micklem, Gos, Oliver, Brian, Park, Peter J., Celniker, Susan E., Henikoff, Steven, Karpen, Gary H., Lai, Eric C., MacAlpine, David M., Stein, Lincoln D., White, Kevin P., Kellis, Manolis

Source: Science, 2010 Dec . 330(6012), 1787-1797.

Access URL: https://www.jstor.org/stable/40986582

A physical map of the genome of Atlantic salmon, Salmo salar

Authors: Ng, Siemon H.S., Artieri, Carlo G., Bosdet, Ian E., Chiu, Readman, Danzmann, Roy G., Davidson, William S., Ferguson, Moira M., Fjell, Christopher D., Hoyheim, Bjorn, Jones, Steven J.M., de Jong, Pieter J., Koop, Ben F., Krzywinski, Martin I., Lubieniecki, Krzysztof, Marra, Marco A., Mitchell, Leslie A., Mathewson, Carrie, Osoegawa, Kazutoyo, Parisotto, Sarah E., Phillips, Ruth B., Rise, Matthew L., von Schalburg, Kristian R., Schein, Jacqueline E., Shin, Heesun, Siddiqui, Asim, Thorsen, Jim, Wye, Natasja, Yang, George, Zhu, Baoli

Source: In Genomics 2005 86(4):396-404

Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila

Authors: Artieri Carlo G, Singh Rama S

Source: BMC Biology, Vol 8, Iss 1, p 26 (2010)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.biomedcentral.com/1741-7007/8/26; https://doaj.org/toc/1741-7007

Access URL: https://doaj.org/article/47607320c93143109781485c41d36504

Ontogeny and phylogeny: molecular signatures of selection, constraint, and temporal pleiotropy in the development of Drosophila

Authors: Haerty Wilfried, Artieri Carlo G, Singh Rama S

Source: BMC Biology, Vol 7, Iss 1, p 42 (2009)

Subject Terms: Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.biomedcentral.com/1741-7007/7/42; https://doaj.org/toc/1741-7007

Access URL: https://doaj.org/article/3194be6f46824f579f3b97b749946b38

Comparative analysis of function and interaction of transcription factors in nematodes: Extensive conservation of orthology coupled to rapid sequence evolution

Authors: Singh Rama S, Khezri Navid, Artieri Carlo, Haerty Wilfried, Gupta Bhagwati P

Source: BMC Genomics, Vol 9, Iss 1, p 399 (2008)

Subject Terms: Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: http://www.biomedcentral.com/1471-2164/9/399; https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/12b2dfd409fb479cb5dc9b3f96f30f77

251: NIPS for high BMI patients: Evaluating the impact of deep whole genome sequencing on sensitivity and residual risk

Authors: Muzzey, Dale, Haverty, Carrie E., Artieri, Carlo G., D'Auria, Kevin M., Haas, Kevin R., Kang, H. Peter, Evans, Eric A.

Source: American journal of obstetrics and gynecology. 218(S):S162-S162

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100129285978.0x000001&indx=1&recIds=ETOCvdc_100129285978.0x000001

Dissecting the Genetic Basis of a Complex cis-Regulatory Adaptation.

Authors: Naranjo, Santiago¹, Smith, Justin D.^2,3, Artieri, Carlo G.¹, Zhang, Mian¹, Zhou, Yiqi¹, Palmer, Michael E.¹, Fraser, Hunter B.¹, hbfraser@stanford.edu

Source: PLoS Genetics; 12/29/2015, Vol. 11 Issue 12, p1-19, 19p

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The developmental transcriptome of Drosophila melanogaster.

Authors: Graveley, Brenton R., Brooks, Angela N., Carlson, Joseph W., Duff, Michael O., Landolin, Jane M., Yang, Li, Artieri, Carlo G., van Baren, Marijke J., Boley, Nathan, Booth, Benjamin W., Brown, James B., Cherbas, Lucy, Davis, Carrie A., Dobin, Alex, Renhua Li, Wei Lin, Malone, John H., Mattiuzzo, Nicolas R., Miller, David, Sturgill, David

Source: Nature. 3/24/2011, Vol. 471 Issue 7339, p473-479. 7p. 1 Color Photograph, 1 Diagram, 1 Chart, 3 Graphs.

Subjects: DROSOPHILA melanogaster, TRANSGENIC organisms, GENOMES, RIBONUCLEASES, EXONS (Genetics)

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