Common molecular features of H3K27M DMGs and PFA ependymomas map to hindbrain developmental pathways

Authors: Matthew Pun, Drew Pratt, Patricia R. Nano, Piyush K. Joshi, Li Jiang, Bernhard Englinger, Arvind Rao, Marcin Cieslik, Arul M. Chinnaiyan, Kenneth Aldape, Stefan Pfister, Mariella G. Filbin, Aparna Bhaduri, Sriram Venneti

Source: Acta Neuropathologica Communications, Vol 11, Iss 1, Pp 1-19 (2023)

Subject Terms: Cancer, Chromatin biology, Onco-histones, Pediatric tumors, Brain development, Neuro-oncology, Neurology. Diseases of the nervous system, RC346-429

File Description: electronic resource

Relation: https://doaj.org/toc/2051-5960

Access URL: https://doaj.org/article/321f01c2cef0476ebdbcaea7e4469b04

Identification of Lipid Heterogeneity and Diversity in the Developing Human Brain

Authors: Aparna Bhaduri, Elizabeth K. Neumann, Arnold R. Kriegstein, Jonathan V. Sweedler

Source: JACS Au, Vol 1, Iss 12, Pp 2261-2270 (2021)

Subject Terms: Chemistry, QD1-999

File Description: electronic resource

Relation: https://doaj.org/toc/2691-3704

Access URL: https://doaj.org/article/4504e63f47634c9d8e76ceb5b25c5fc9

Cortical Cartography: Mapping Arealization Using Single-Cell Omics Technology

Authors: Patricia R. Nano, Claudia V. Nguyen, Jessenya Mil, Aparna Bhaduri

Source: Frontiers in Neural Circuits, Vol 15 (2021)

Subject Terms: cortex, development, single-cell, multi-omic, regions, Neurosciences. Biological psychiatry. Neuropsychiatry, RC321-571

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fncir.2021.788560/full; https://doaj.org/toc/1662-5110

Access URL: https://doaj.org/article/bb4fdd9a2540412db7fd01be08534491

Rapid deployment of SARS-CoV-2 testing: The CLIAHUB.

Authors: Emily D Crawford, Irene Acosta, Vida Ahyong, Erika C Anderson, Shaun Arevalo, Daniel Asarnow, Shannon Axelrod, Patrick Ayscue, Camillia S Azimi, Caleigh M Azumaya, Stefanie Bachl, Iris Bachmutsky, Aparna Bhaduri, Jeremy Bancroft Brown, Joshua Batson, Astrid Behnert, Ryan M Boileau, Saumya R Bollam, Alain R Bonny, David Booth, Michael Jerico B Borja, David Brown, Bryan Buie, Cassandra E Burnett, Lauren E Byrnes, Katelyn A Cabral, Joana P Cabrera, Saharai Caldera, Gabriela Canales, Gloria R Castañeda, Agnes Protacio Chan, Christopher R Chang, Arthur Charles-Orszag, Carly Cheung, Unseng Chio, Eric D Chow, Y Rose Citron, Allison Cohen, Lillian B Cohn, Charles Chiu, Mitchel A Cole, Daniel N Conrad, Angela Constantino, Andrew Cote, Tre'Jon Crayton-Hall, Spyros Darmanis, Angela M Detweiler, Rebekah L Dial, Shen Dong, Elias M Duarte, David Dynerman, Rebecca Egger, Alison Fanton, Stacey M Frumm, Becky Xu Hua Fu, Valentina E Garcia, Julie Garcia, Christina Gladkova, Miriam Goldman, Rafael Gomez-Sjoberg, M Grace Gordon, James C R Grove, Shweta Gupta, Alexis Haddjeri-Hopkins, Pierce Hadley, John Haliburton, Samantha L Hao, George Hartoularos, Nadia Herrera, Melissa Hilberg, Kit Ying E Ho, Nicholas Hoppe, Shayan Hosseinzadeh, Conor J Howard, Jeffrey A Hussmann, Elizabeth Hwang, Danielle Ingebrigtsen, Julia R Jackson, Ziad M Jowhar, Danielle Kain, James Y S Kim, Amy Kistler, Oriana Kreutzfeld, Jessie Kulsuptrakul, Andrew F Kung, Charles Langelier, Matthew T Laurie, Lena Lee, Kun Leng, Kristoffer E Leon, Manuel D Leonetti, Sophia R Levan, Sam Li, Aileen W Li, Jamin Liu, Heidi S Lubin, Amy Lyden, Jennifer Mann, Sabrina Mann, Gorica Margulis, Diana M Marquez, Bryan P Marsh, Calla Martyn, Elizabeth E McCarthy, Aaron McGeever, Alexander F Merriman, Lauren K Meyer, Steve Miller, Megan K Moore, Cody T Mowery, Tanzila Mukhtar, Lusajo L Mwakibete, Noelle Narez, Norma F Neff, Lindsay A Osso, Diter Oviedo, Suping Peng, Maira Phelps, Kiet Phong, Peter Picard, Lindsey M Pieper, Neha Pincha, Angela Oliveira Pisco, Angela Pogson, Sergei Pourmal, Robert R Puccinelli, Andreas S Puschnik, Elze Rackaityte, Preethi Raghavan, Madhura Raghavan, James Reese, Joseph M Replogle, Hanna Retallack, Helen Reyes, Donald Rose, Marci F Rosenberg, Estella Sanchez-Guerrero, Sydney M Sattler, Laura Savy, Stephanie K See, Kristin K Sellers, Paula Hayakawa Serpa, Maureen Sheehy, Jonathan Sheu, Sukrit Silas, Jessica A Streithorst, Jack Strickland, Doug Stryke, Sara Sunshine, Peter Suslow, Renaldo Sutanto, Serena Tamura, Michelle Tan, Jiongyi Tan, Alice Tang, Cristina M Tato, Jack C Taylor, Iliana Tenvooren, Erin M Thompson, Edward C Thornborrow, Eric Tse, Tony Tung, Marc L Turner, Victoria S Turner, Rigney E Turnham, Mary J Turocy, Trisha V Vaidyanathan, Ilia D Vainchtein, Manu Vanaerschot, Sara E Vazquez, Anica M Wandler, Anne Wapniarski, James T Webber, Zara Y Weinberg, Alexandra Westbrook, Allison W Wong, Emily Wong, Gajus Worthington, Fang Xie, Albert Xu, Terrina Yamamoto, Ying Yang, Fauna Yarza, Yefim Zaltsman, Tina Zheng, Joseph L DeRisi

Source: PLoS Pathogens, Vol 16, Iss 10, p e1008966 (2020)

Subject Terms: Immunologic diseases. Allergy, RC581-607, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://doaj.org/toc/1553-7366; https://doaj.org/toc/1553-7374

Access URL: https://doaj.org/article/3bbb68a359bd42bc9db996dc6d89e140

Identification of cell types in a mouse brain single-cell atlas using low sampling coverage

Authors: Aparna Bhaduri, Tomasz J Nowakowski, Alex A Pollen, Arnold R Kriegstein

Source: BMC Biology, Vol 16, Iss 1, Pp 1-10 (2018)

Subject Terms: Single-cell analysis, Downsampling, Cell atlas studies, Bioinformatics, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s12915-018-0580-x; https://doaj.org/toc/1741-7007

Access URL: https://doaj.org/article/40b29e23f6ab450fb785fae09491b92b

Next-generation sequencing of idiopathic multicentric and unicentric Castleman disease and follicular dendritic cell sarcomas

Authors: Alexandra Nagy, Aparna Bhaduri, Nahid Shahmarvand, Jahanbanoo Shahryari, James L. Zehnder, Roger A. Warnke, Tariq Mughal, Siraj Ali, Robert S. Ohgami

Source: Blood Advances, Vol 2, Iss 5, Pp 481-491 (2018)

Subject Terms: Specialties of internal medicine, RC581-951

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2473952920310703; https://doaj.org/toc/2473-9529

Access URL: https://doaj.org/article/ed23b9e6ab5f434f8db458b54d327323

Single-cell profiling of human gliomas reveals macrophage ontogeny as a basis for regional differences in macrophage activation in the tumor microenvironment

Authors: Sören Müller, Gary Kohanbash, S. John Liu, Beatriz Alvarado, Diego Carrera, Aparna Bhaduri, Payal B. Watchmaker, Garima Yagnik, Elizabeth Di Lullo, Martina Malatesta, Nduka M. Amankulor, Arnold R. Kriegstein, Daniel A. Lim, Manish Aghi, Hideho Okada, Aaron Diaz

Source: Genome Biology, Vol 18, Iss 1, Pp 1-14 (2017)

Subject Terms: Glioma, Single-cell sequencing, Immunotherapy, Macrophage, Biology (General), QH301-705.5, Genetics, QH426-470

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s13059-017-1362-4; https://doaj.org/toc/1474-760X

Access URL: https://doaj.org/article/b3ec0e0d5c1c43f3ad2d248d295ddd67

Quantitative analysis of mammalian translation initiation sites by FACS‐seq

Authors: William L Noderer, Ross J Flockhart, Aparna Bhaduri, Alexander J Diaz de Arce, Jiajing Zhang, Paul A Khavari, Clifford L Wang

Source: Molecular Systems Biology, Vol 10, Iss 8, Pp 1-14 (2014)

Subject Terms: FACS‐seq, Kozak motif, proteome modeling, start codon, translation initiation, Biology (General), QH301-705.5, Medicine (General), R5-920

File Description: electronic resource

Relation: https://doaj.org/toc/1744-4292

Access URL: https://doaj.org/article/625d5f659358470db2db9b4ec490a83b

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Product Profile of PEN3: The Last Unexamined Oxidosqualene Cyclase in Arabidopsis thaliana.

Authors: Pietro Morlacchi, William K. Wilson, Quanbo Xiong, Aparna Bhaduri, Diana Sttivend, Mariya D. Kolesnikova, Seiichi P. T. Matsuda

Source: Organic Letters; Jun2009, Vol. 11 Issue 12, p2627-2630, 4p

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