'Outlaw' mutations in quasispecies of SARS-CoV-2 inhibit replication

Authors: Philippe Colson, Jacques Fantini, Jeremy Delerce, Wahiba Bader, Anthony Levasseur, Pierre Pontarotti, Christian Devaux, Didier Raoult

Source: Emerging Microbes and Infections, Vol 13, Iss 1 (2024)

Subject Terms: SARS-CoV-2, genomics, mutations, quasispecies, evolution, next-generation sequencing, Infectious and parasitic diseases, RC109-216, Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/2222-1751

Access URL: https://doaj.org/article/87097a1daa25467e8137c8798b42c197

Is it time to switch to a formulation other than the live attenuated poliovirus vaccine to prevent poliomyelitis?

Authors: Christian Albert Devaux, Pierre Pontarotti, Anthony Levasseur, Philippe Colson, Didier Raoult

Source: Frontiers in Public Health, Vol 11 (2024)

Subject Terms: poliovirus, live attenuated virus vaccine, revertant virus, recombinant virus, nonhuman primate, Public aspects of medicine, RA1-1270

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fpubh.2023.1284337/full; https://doaj.org/toc/2296-2565

Access URL: https://doaj.org/article/eb409c283afb496e853bd3a16d628121

Retraction Note: Dramatic HIV DNA degradation associated with spontaneous HIV suppression and disease-free outcome in a young seropositive woman following her infection

Authors: Philippe Colson, Catherine Dhiver, Catherine Tamalet, Jeremy Delerce, Olga O. Glazunova, Maxime Gaudin, Anthony Levasseur, Didier Raoult

Source: Scientific Reports, Vol 14, Iss 1, Pp 1-1 (2024)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/0520a3db9c22435f92cf51b1406317df

SARS-CoV-2 quasi-species analysis from patients with persistent nasopharyngeal shedding

Authors: Pierre Dudouet, Philippe Colson, Sarah Aherfi, Anthony Levasseur, Mamadou Beye, Jeremy Delerce, Emilie Burel, Philippe Lavrard, Wahiba Bader, Jean-Christophe Lagier, Pierre-Edouard Fournier, Bernard La Scola, Didier Raoult

Source: Scientific Reports, Vol 12, Iss 1, Pp 1-13 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/7a65f28e06254765a2e1905fd8f106c6

Retraction Note: Repertoire of the gut microbiota from stomach to colon using culturomics and next-generation sequencing

Authors: Morgane Mailhe, Davide Ricaboni, Véronique Vitton, Jean-Michel Gonzalez, Dipankar Bachar, Grégory Dubourg, Frédéric Cadoret, Catherine Rober, Jérémy Delerce, Anthony Levasseur, Pierre-Edouard Fournier, Emmanouil Angelakis, Jean-Christophe Lagier, Didier Raoult

Source: BMC Microbiology, Vol 24, Iss 1, Pp 1-1 (2024)

Subject Terms: Microbiology, QR1-502

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2180

Access URL: https://doaj.org/article/9d9a420dc6d64edd92ed9e2fd0afde2d

Retraction Note: Gut Microbiota Alteration is Characterized by a Proteobacteria and Fusobacteria Bloom in Kwashiorkor and a Bacteroidetes Paucity in Marasmus

Authors: Thi-Phuong-Thao Pham, Maryam Tidjani Alou, Dipankar Bachar, Anthony Levasseur, Souleymane Brah, Daouda Alhousseini, Cheikh Sokhna, Aldiouma Diallo, Frank Wieringa, Matthieu Million, Didier Raoult

Source: Scientific Reports, Vol 13, Iss 1, Pp 1-1 (2023)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/2e6f8d19c5a14d6aa8a87860bc51c80c

Heterogeneity in susceptibility to hydroxychloroquine of SARS-CoV-2 isolates

Authors: Celine Boschi, Marion Le Bideau, Julien Andreani, Sarah Aherfi, Priscilla Jardot, Jeremy Delerce, Mathieu Gendrot, Bruno Pradines, Philippe Colson, Anthony Levasseur, Bernard La Scola

Source: Frontiers in Bioscience-Landmark, Vol 26, Iss 12, Pp 1493-1502 (2021)

Subject Terms: sars-cov-2, hydroxychloroquine, azithromycin, in vitro model, vero e6, wgs, africa, Biochemistry, QD415-436, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://www.imrpress.com/journal/FBL/26/12/10.52586/5043; https://doaj.org/toc/2768-6701

Access URL: https://doaj.org/article/2649a8f800664f90b9c8dcb7c1915bb3

Macrophages and γδ T cells interplay during SARS-CoV-2 variants infection

Authors: Perla Abou Atmeh, Laetitia Gay, Anthony Levasseur, Bernard La Scola, Daniel Olive, Soraya Mezouar, Jean-Pierre Gorvel, Jean-Louis Mege

Source: Frontiers in Immunology, Vol 13 (2022)

Subject Terms: SARS-CoV-2 variants, macrophage, ACE2, γδ T cells, COVID-19, Immunologic diseases. Allergy, RC581-607

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fimmu.2022.1078741/full; https://doaj.org/toc/1664-3224

Access URL: https://doaj.org/article/a41b893f36304826a6474f77d0c2f759

Emergence and outcomes of the SARS-CoV-2 ‘Marseille-4’ variant

Authors: Pierre-Edouard Fournier, Philippe Colson, Anthony Levasseur, Christian A. Devaux, Philippe Gautret, Marielle Bedotto, Jeremy Delerce, Ludivine Brechard, Lucile Pinault, Jean-Christophe Lagier, Florence Fenollar, Didier Raoult

Source: International Journal of Infectious Diseases, Vol 106, Iss , Pp 228-236 (2021)

Subject Terms: SARS-CoV-2, COVID-19, Variant, Marseille-4, Mutations, Spike, Infectious and parasitic diseases, RC109-216

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S1201971221002861; https://doaj.org/toc/1201-9712

Access URL: https://doaj.org/article/f21d38f3597a4ff5bf45e0938d586b49

Potential zoonotic pathogens hosted by endangered bonobos

Authors: Hacène Medkour, Sergei Castaneda, Inestin Amona, Florence Fenollar, Claudine André, Raphaël Belais, Paulin Mungongo, Jean-Jacques Muyembé-Tamfum, Anthony Levasseur, Didier Raoult, Bernard Davoust, Oleg Mediannikov

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-16 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/92edf6d7781f451fabf7a3bb7798b651

Anaerococcus urinimassiliensis sp. nov., a new bacterium isolated from human urine

Authors: Aurélie Morand, Mamadou Lamine Tall, Edmond Kuete Yimagou, Issa Isaac Ngom, Cheikh Ibrahima Lo, Florent Cornu, Michel Tsimaratos, Jean-Christophe Lagier, Anthony Levasseur, Didier Raoult, Pierre-Edouard Fournier

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-12 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/98a59be481154c28abdf67ba757af800

Screening and Whole Genome Sequencing of SARS-CoV-2 Circulating During the First Three Waves of the COVID-19 Pandemic in Libreville and the Haut-Ogooué Province in Gabon

Authors: Sonia Etenna Lekana-Douki, Nadine N'dilimabaka, Anthony Levasseur, Philippe Colson, Julia Cyrielle Andeko, Ornella Zong Minko, Octavie Banga Mve-Ella, Pierre-Edouard Fournier, Christian Devaux, Bertrand Mve Ondo, Falone Larissa Akombi, Laurianne Yacka Mouele Bolo, Audrey Michel Ngonga Dikongo, Abdoulaye Diané, Arsène Mabika Mabika, Jenny Francine Mathouet, Cresh Dzembo, Nick Chenis Atiga, Anicet Mouity Matoumba, Nal Kennedy Ndjangangoye, Ludivine Bréchard, Marielle Bedotto-Buffet, Joa Braithe Mangombi Pambou, Marisca Kandet Yattara, Elvire Anita Mbongo Nkama, Armel Mintsa Ndong, Ayola Akim Adegnika, Didier Raoult, Florence Fenollar, Jean-Bernard Lekana-Douki

Source: Frontiers in Medicine, Vol 9 (2022)

Subject Terms: SARS-CoV-2, variant, whole genome sequencing, Libreville and Haut-Ogooué, Gabon, Medicine (General), R5-920

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmed.2022.877391/full; https://doaj.org/toc/2296-858X

Access URL: https://doaj.org/article/ebf4abbed17945d598985e33bbe983b3

Tracking Mycoviruses in Public RNAseq Datasets of Malassezia: Three Original Totiviruses Revealed

Authors: Fatima Boulanouar, Stéphane Ranque, Anthony Levasseur

Source: Viruses, Vol 15, Iss 6, p 1368 (2023)

Subject Terms: Malassezia, mycovirus, Totivirus, transcriptomes, dsRNA, fungal evolution, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.mdpi.com/1999-4915/15/6/1368; https://doaj.org/toc/1999-4915

Access URL: https://doaj.org/article/99c9431ae9d9464eae5c3d37c15dcb28

Analysis of SARS-CoV-2 Variants From 24,181 Patients Exemplifies the Role of Globalization and Zoonosis in Pandemics

Authors: Philippe Colson, Pierre-Edouard Fournier, Hervé Chaudet, Jérémy Delerce, Audrey Giraud-Gatineau, Linda Houhamdi, Claudia Andrieu, Ludivine Brechard, Marielle Bedotto, Elsa Prudent, Céline Gazin, Mamadou Beye, Emilie Burel, Pierre Dudouet, Hervé Tissot-Dupont, Philippe Gautret, Jean-Christophe Lagier, Matthieu Million, Philippe Brouqui, Philippe Parola, Florence Fenollar, Michel Drancourt, Bernard La Scola, Anthony Levasseur, Didier Raoult

Source: Frontiers in Microbiology, Vol 12 (2022)

Subject Terms: SARS-CoV-2, variant, mutant, classification, travel, zoonosis, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.786233/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/e6f15bacfb314f17b4a26b2f836112e4

Whole Genome Sequencing of SARS-CoV-2 Strains in COVID-19 Patients From Djibouti Shows Novel Mutations and Clades Replacing Over Time

Authors: Ikram Omar Osman, Anthony Levasseur, Ludivine Brechard, Iman Abdillahi Hassan, Idil Salah Abdillahi, Zeinab Ali Waberi, Jeremy Delerce, Marielle Bedotto, Linda Houhamdi, Pierre-Edouard Fournier, Philippe Colson, Mohamed Houmed Aboubaker, Didier Raoult, Christian A. Devaux

Source: Frontiers in Medicine, Vol 8 (2021)

Subject Terms: SARS-CoV-2, UK variant, South African variant, Marseille 4 variant, COVID-19, epidemics, Medicine (General), R5-920

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmed.2021.737602/full; https://doaj.org/toc/2296-858X

Access URL: https://doaj.org/article/d00cb3149bf84e569231f012d34d58ed

Morphological and Genomic Features of the New Klosneuvirinae Isolate Fadolivirus IHUMI-VV54

Authors: Julien Andreani, Frederik Schulz, Fabrizio Di Pinto, Anthony Levasseur, Tanja Woyke, Bernard La Scola

Source: Frontiers in Microbiology, Vol 12 (2021)

Subject Terms: Vermamoeba vermiformis, giant virus, translation components, Mimiviridae, ATPase subunits, Klosneuvirinae, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.719703/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/87d5bc94be88459d8c9a8ad7f973057c

Spread of Mink SARS-CoV-2 Variants in Humans: A Model of Sarbecovirus Interspecies Evolution

Authors: Christian A. Devaux, Lucile Pinault, Jérémy Delerce, Didier Raoult, Anthony Levasseur, Roger Frutos

Source: Frontiers in Microbiology, Vol 12 (2021)

Subject Terms: SARS-CoV-2, variant viruses, mink coronavirus, COVID-19, ACE2, NRP-1, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.675528/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/a2094d873d0840ecb83affb7fbcc0220

Clandestinovirus: A Giant Virus With Chromatin Proteins and a Potential to Manipulate the Cell Cycle of Its Host Vermamoeba vermiformis

Authors: Clara Rolland, Julien Andreani, Dehia Sahmi-Bounsiar, Mart Krupovic, Bernard La Scola, Anthony Levasseur

Source: Frontiers in Microbiology, Vol 12 (2021)

Subject Terms: giant virus, nucleocytoviricota, clandestinovirus, histones, mitochondria, amoeba, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.715608/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/c71ee8bdf77942cdb986718413aca8f2

Marseilleviruses: An Update in 2021

Authors: Dehia Sahmi-Bounsiar, Clara Rolland, Sarah Aherfi, Hadjer Boudjemaa, Anthony Levasseur, Bernard La Scola, Philippe Colson

Source: Frontiers in Microbiology, Vol 12 (2021)

Subject Terms: marseillevirus, Marseilleviridae, giant virus, amoeba, Pimascovirales, megavirales, Microbiology, QR1-502

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fmicb.2021.648731/full; https://doaj.org/toc/1664-302X

Access URL: https://doaj.org/article/988790a1451a4a4cac11b3765696c745

A Listeria monocytogenes clone in human breast milk associated with severe acute malnutrition in West Africa: A multicentric case-controlled study.

Authors: Marièma Sarr, Maryam Tidjani Alou, Jeremy Delerce, Saber Khelaifia, Nafissatou Diagne, Aldiouma Diallo, Hubert Bassene, Ludivine Bréchard, Vincent Bossi, Babacar Mbaye, Jean-Christophe Lagier, Anthony Levasseur, Cheikh Sokhna, Matthieu Million, Didier Raoult

Source: PLoS Neglected Tropical Diseases, Vol 15, Iss 6, p e0009555 (2021)

Subject Terms: Arctic medicine. Tropical medicine, RC955-962, Public aspects of medicine, RA1-1270

File Description: electronic resource

Relation: https://doaj.org/toc/1935-2727; https://doaj.org/toc/1935-2735

Access URL: https://doaj.org/article/981067b968244e8f97d2041887cb49f5