The gut microbiome, short chain fatty acids, and related metabolites in cystic fibrosis patients with and without colonic adenomas

Authors: Baldwin-Hunter, Brittany L., Rozenberg, Felix D., Annavajhala, Medini K., Park, Heekuk, DiMango, Emily A., Keating, Claire L., Uhlemann, Anne-Catrin, Abrams, Julian A.

Source: In Journal of Cystic Fibrosis July 2023 22(4):738-744

Prolonged severe acute respiratory syndrome coronavirus 2 persistence, attenuated immunologic response, and viral evolution in a solid organ transplant patient

Authors: Purpura, Lawrence J., Chang, Michelle, Annavajhala, Medini K., Mohri, Hiroshi, Liu, Lihong, Shah, Jayesh, Cantos, Anyelina, Medrano, Nicola, Laracy, Justin, Scully, Brian, Miko, Benjamin A., Habal, Marlena, Pereira, Marcus R., Tsuji, Moriya, Ho, David D., Uhlemann, Anne‐Catrin, Yin, Michael T.

Source: American journal of transplantation. 22(2):649-653

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100141565338.0x000001&indx=1&recIds=ETOCvdc_100141565338.0x000001

Prolonged outbreak of clonal, mupirocin-resistant methicillin-resistant Staphylococcus aureus in a neonatal intensive care unit: association with personnel and a possible environmental reservoir, analyzed using whole genome sequencing

Authors: Rubin, Lorry G, Beachy, Joanna, Matz, Tara, Balamohan, Archana, Jendresky, Linda, Zembera, Jill, Annavajhala, Medini K, Uhlemann, Anne-Catrin

Source: American journal of infection control. 50(6):680-685

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100163706008.0x000001&indx=1&recIds=ETOCvdc_100163706008.0x000001

Population structure of blaKPC-harbouring IncN plasmids at a New York City medical centre and evidence for multi-species horizontal transmission

Authors: Gomez-Simmonds, Angela, Annavajhala, Medini K, Tang, Nina, Rozenberg, Felix D, Ahmad, Mehrose, Park, Heekuk, Lopatkin, Allison J, Uhlemann, Anne Catrin

Source: Journal of antimicrobial chemotherapy. 77(7):1873-1882

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100164172294.0x000001&indx=1&recIds=ETOCvdc_100164172294.0x000001

Development and performance of a point-of-care rapid antigen test for detection of SARS-COV-2 variants

Authors: Liu, Lihong, Meyers, Kathrine, Purpura, Lawrence J., Nguyen, Nadia, Mohri, Hiroshi, Chang, Jennifer Y., Annavajhala, Medini K., Lopez, Leo, III, Lee, Sang Won, Shah, Jayesh, Lane, Benjamin, Cantos, Anyelina, Tukuru, Sade A., Guo, Yicheng, Ford, Kenra, Chiu, Yueh-Ting, Sheng, Zizhang, Choesang, Tenzin, Castor, Delivette, Wang, Maple, Pili, Christina, Van Hoy, Michael N., Wallach, Andrew, Horton, Jamie, Chen, Zhiqiang, Rosenthal, Susan, McLaren, Son, Jiang, Baowei, Wang, Frank, Lu, Helen H., Uhlemann, Anne-Catrin, Ho, David D., Yin, Michael T.

Source: In Journal of Clinical Virology Plus August 2022 2(3)

Placental Infection with Different SARS-CoV-2 Variants Leading to Stillbirth: Report of Two Cases.

Authors: Snow, Miriam A.¹ (AUTHOR) mah2228@cumc.columbia.edu, Annavajhala, Medini K.² (AUTHOR) annavajham@chop.edu, Moscovitz, Sofia Z.³ (AUTHOR) szm2110@cumc.columbia.edu, Uhlemann, Anne-Catrin³ (AUTHOR) au2110@cumc.columbia.edu, Debelenko, Larisa¹ (AUTHOR) ld2863@cumc.columbia.edu

Source: COVID. Jan2025, Vol. 5 Issue 1, p8. 8p.

Subject Terms: *SARS-CoV-2 Delta variant, *THIRD trimester of pregnancy, *SARS-CoV-2, *SARS-CoV-2 Omicron variant, *IN situ hybridization

Klebsiella pneumoniae induces host metabolic stress that promotes tolerance to pulmonary infection

Authors: Wong Fok Lung, Tania, Charytonowicz, Daniel, Beaumont, Kristin G., Shah, Shivang S., Sridhar, Shwetha H., Gorrie, Claire L., Mu, Andre, Hofstaedter, Casey E., Varisco, David, McConville, Thomas H., Drikic, Marija, Fowler, Brandon, Urso, Andreacarola, Shi, Wei, Fucich, Dario, Annavajhala, Medini K., Khan, Ibrahim N., Oussenko, Irina, Francoeur, Nancy, Smith, Melissa L., Stockwell, Brent R., Lewis, Ian A., Hachani, Abderrahman, Upadhyay Baskota, Swikrity, Uhlemann, Anne-Catrin, Ahn, Danielle, Ernst, Robert K., Howden, Benjamin P., Sebra, Robert, Prince, Alice

Source: In Cell Metabolism 3 May 2022 34(5):761-774

An acquired acyltransferase promotes Klebsiella pneumoniae ST258 respiratory infection

Authors: Ahn, Danielle, Bhushan, Gitanjali, McConville, Thomas H., Annavajhala, Medini K., Soni, Rajesh Kumar, Wong Fok Lung, Tania, Hofstaedter, Casey E., Shah, Shivang S., Chong, Alexander M., Castano, Victor G., Ernst, Robert K., Uhlemann, Anne-Catrin, Prince, Alice

Source: In Cell Reports 1 June 2021 35(9)

Associations between urinary 3-indoxyl sulfate, a gut microbiome-derived biomarker, and patient outcomes after intensive care unit admission

Authors: Kuo, Selena Z., Dettmer, Katja, Annavajhala, Medini K., Chong, David H., Uhlemann, Anne-Catrin, Abrams, Julian A., Oefner, Peter J., Freedberg, Daniel E.

Source: In Journal of Critical Care June 2021 63:15-21

Spa Typing of Staphylococcus aureus in a Neonatal Intensive Care Unit During Routine Surveillance

Authors: Grohs, Emily, Hill-Ricciuti, Alexandra, Kelly, Nicole, Messina, Maria, Green, Daniel A, Geng, Wenjing, Annavajhala, Medini K, Zachariah, Philip, Mathema, Barun, Uhlemann, Anne-Catrin, Saiman, Lisa

Source: Journal of the Pediatric Infectious Diseases Society. 10(7):766-773

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100128624125.0x000001&indx=1&recIds=ETOCvdc_100128624125.0x000001

Carbapenemase-producing Enterobacterales causing secondary infections during the COVID-19 crisis at a New York City hospital

Authors: Gomez-Simmonds, Angela, Annavajhala, Medini K, McConville, Thomas H, Dietz, Donald E, Shoucri, Sherif M, Laracy, Justin C, Rozenberg, Felix D, Nelson, Brian, Greendyke, William G, Furuya, E Yoko, Whittier, Susan, Uhlemann, Anne-Catrin

Source: Journal of antimicrobial chemotherapy. 76(2):380-384

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100114313920.0x000001&indx=1&recIds=ETOCvdc_100114313920.0x000001

CrrB Positively Regulates High-Level Polymyxin Resistance and Virulence in Klebsiella pneumoniae

Authors: McConville, Thomas H., Annavajhala, Medini K., Giddins, Marla J., Macesic, Nenad, Herrera, Carmen M., Rozenberg, Felix D., Bhushan, Gitanjali L., Ahn, Danielle, Mancia, Filippo, Trent, M. Stephen, Uhlemann, Anne-Catrin

Source: In Cell Reports 27 October 2020 33(4)

Subgingival microbiome and clinical periodontal status in an elderly cohort: The WHICAP ancillary study of oral health

Authors: Papapanou, Panos N., Park, Heekuk, Cheng, Bin, Kokaras, Alexis, Paster, Bruce, Burkett, Sandra, Watson, Caitlin Wei‐Ming, Annavajhala, Medini K., Uhlemann, Anne‐Catrin, Noble, James M.

Source: Journal of periodontology. 91(1):S56-S67

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100108485282.0x000001&indx=1&recIds=ETOCvdc_100108485282.0x000001

Reduction in Risk of Death Among Patients Admitted With COVID-19 Between the First and Second Epidemic Waves in New York City

Authors: Bowen, Anthony, Zucker, Jason, Shen, Yanhan, Huang, Simian, Yan, Qiheng, Annavajhala, Medini K, Uhlemann, Anne-Catrin, Kuhn, Louise, Sobieszczyk, Magdalena, Castor, Delivette

Source: Open forum infectious diseases. 9(9)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100163735261.0x000001&indx=1&recIds=ETOCvdc_100163735261.0x000001

Pathogen colonization of the gastrointestinal microbiome at intensive care unit admission and risk for subsequent death or infection

Authors: Freedberg, Daniel E., Zhou, Margaret J., Cohen, Margot E., Annavajhala, Medini K., Khan, Sabrina, Moscoso, Dagmara I., Brooks, Christian, Whittier, Susan, Chong, David H., Uhlemann, Anne-Catrin, Abrams, Julian A.

Source: Intensive care medicine. 44(8):1203-1211

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100125264950.0x000001&indx=1&recIds=ETOCvdc_100125264950.0x000001

Periodontitis and brain magnetic resonance imaging markers of Alzheimer's disease and cognitive aging.

Authors: Rubinstein, Tom, Brickman, Adam M., Cheng, Bin, Burkett, Sandra, Park, Heekuk, Annavajhala, Medini K., Uhlemann, Anne‐Catrin, Andrews, Howard, Gutierrez, Jose, Paster, Bruce J., Noble, James M., Papapanou, Panos N.

Source: Alzheimer's & Dementia: The Journal of the Alzheimer's Association; Mar2024, Vol. 20 Issue 3, p2191-2208, 18p

Pretest Symptom Duration and Cycle Threshold Values for Severe Acute Respiratory Syndrome Coronavirus 2 Reverse-Transcription Polymerase Chain Reaction Predict Coronavirus Disease 2019 Mortality

Authors: Miller, Emily Happy, Zucker, Jason, Castor, Delivette, Annavajhala, Medini K, Sepulveda, Jorge L, Green, Daniel A, Whittier, Susan, Scherer, Matthew, Medrano, Nicola, Sobieszczyk, Magdalena E, Yin, Michael T, Kuhn, Louise, Uhlemann, Anne-Catrin

Source: Open forum infectious diseases. 8(2)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100128213010.0x000001&indx=1&recIds=ETOCvdc_100128213010.0x000001

Transfusional iron overload and intravenous iron infusions modify the mouse gut microbiota similarly to dietary iron

Authors: La Carpia, Francesca, Wojczyk, Boguslaw S., Annavajhala, Medini K., Rebbaa, Abdelhadi, Culp-Hill, Rachel, D'Alessandro, Angelo, Freedberg, Daniel E., Uhlemann, Anne-Catrin, Hod, Eldad A.

Source: Npj biofilms and microbiomes. 5(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100132530029.0x000001&indx=1&recIds=ETOCvdc_100132530029.0x000001

Colonizing multidrug-resistant bacteria and the longitudinal evolution of the intestinal microbiome after liver transplantation

Authors: Annavajhala, Medini K., Gomez-Simmonds, Angela, Macesic, Nenad, Sullivan, Sean B., Kress, Anna, Khan, Sabrina D., Giddins, Marla J., Stump, Stephania, Kim, Grace I., Narain, Ryan, Verna, Elizabeth C., Uhlemann, Anne-Catrin

Source: Nature communications. 10(1)

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCvdc_100130875505.0x000001&indx=1&recIds=ETOCvdc_100130875505.0x000001

Multiple pathways for SARS-CoV-2 resistance to nirmatrelvir.

Authors: Iketani, Sho, Mohri, Hiroshi, Culbertson, Bruce, Hong, Seo Jung, Duan, Yinkai, Luck, Maria I., Annavajhala, Medini K., Guo, Yicheng, Sheng, Zizhang, Uhlemann, Anne-Catrin, Goff, Stephen P., Sabo, Yosef, Yang, Haitao, Chavez, Alejandro, Ho, David D.

Source: Nature; Jan2023, Vol. 613 Issue 7944, p558-564, 7p