The landscape of autosomal-recessive pathogenic variants in European populations reveals phenotype-specific effects

Authors: Fridman, Hila, Yntema, Helger G., Mägi, Reedik, Andreson, Reidar, Metspalu, Andres, Mezzavilla, Massimo, Tyler-Smith, Chris, Xue, Yali, Carmi, Shai, Levy-Lahad, Ephrat, Gilissen, Christian, Brunner, Han G.

Source: In The American Journal of Human Genetics 1 April 2021 108(4):608-619

Methods and software for predicting PCR failure rate in large genomes
Meetodid ja tarkvara PCR praimerite töötamise ennustamiseks suurtes genoomsetes DNA järjestustes

Authors: Andreson, Reidar

Availability: http://data.europeana.eu/aggregation/europeana/92097/BibliographicResource_1000126664130

Gut microbiome in endometriosis: a cohort study on 1000 individuals.

Authors: Pérez-Prieto, Inmaculada, Vargas, Eva, Salas-Espejo, Eduardo, Lüll, Kreete, Canha-Gouveia, Analuce, Pérez, Laura Antequera, Fontes, Juan, Salumets, Andres, Andreson, Reidar, Aasmets, Oliver, Mait, Metspalu, Andres, Metspalu, Lili, Milani, Tõnu, Esko, Whiteson, Katrine, Org, Elin, Altmäe, Signe

Source: BMC Medicine; 7/18/2024, Vol. 22 Issue 1, p1-12, 12p

Subject Terms: SHOTGUN sequencing, GUT microbiome, ENDOMETRIOSIS, DATABASES, ENCYCLOPEDIAS & dictionaries

Fast Masking of Repeated Primer Binding Sites in Eukaryotic Genomes

Authors: Andreson, Reidar, Kaplinski, Lauris, Remm, Maido

Source: Methods in molecular biology. 1275:1-16

Availability: http://explore.bl.uk/primo_library/libweb/action/display.do?tabs=detailsTab&gathStatTab=true&ct=display&fn=search&doc=ETOCRN600276371&indx=1&recIds=ETOCRN600276371

Correction: Gut microbiome in endometriosis: a cohort study on 1000 individuals.

Authors: Pérez-Prieto, Inmaculada, Vargas, Eva, Salas-Espejo, Eduardo, Lüll, Kreete, Canha-Gouveia, Analuce, Pérez, Laura Antequera, Fontes, Juan, Salumets, Andres, Andreson, Reidar, Aasmets, Oliver, Whiteson, Katrine, Org, Elin, Altmäe, Signe

Source: BMC Medicine; 10/10/2024, Vol. 22 Issue 1, p1-2, 2p

Subject Terms: GUT microbiome, MOLECULAR biology, CLINICAL medicine, CYTOLOGY, REPRODUCTIVE health

A history of repeated antibiotic usage leads to microbiota-dependent mucus defects

Authors: Krigul, Kertu Liis, Feeney, Rachel H., Wongkuna, Supapit, Aasmets, Oliver, Holmberg, Sandra M., Andreson, Reidar, Puértolas-Balint, Fabiola, Pantiukh, Kateryna, Sootak, Linda, Org, Tõnis, Tenson, Tanel, Org, Elin, Schroeder, Bjoern O.

Source: Gut Microbes; December 2024, Vol. 16 Issue: 1

Profile of whole blood gene expression following immune stimulation in a wild passerine.

Authors: Meitern, Richard¹ richard.meitern@ut.ee, Andreson, Reidar² reidar.andreson@ut.ee, HÕrak, Peeter¹ horak@ut.ee

Source: BMC Genomics. 2014, Vol. 15 Issue 1, p1-22. 22p.

Subject Terms: *GENE expression, *IMMUNE system, *BIRD diseases, *PASSERIFORMES, *BLOOD testing, *GENETICS, *THERAPEUTICS

GENOMEMASKER package for designing unique genomic PCR primers

Authors: Kaplinski Lauris, Reppo Eric, Andreson Reidar, Remm Maido

Source: BMC Bioinformatics, Vol 7, Iss 1, p 172 (2006)

Subject Terms: Computer applications to medicine. Medical informatics, R858-859.7, Biology (General), QH301-705.5

File Description: electronic resource

Relation: http://www.biomedcentral.com/1471-2105/7/172; https://doaj.org/toc/1471-2105

Access URL: https://doaj.org/article/1256e00767bf4852a54a937e436f898f

Genome-wide histone modification profiling of inner cell mass and trophectoderm of bovine blastocysts by RAT-ChIP.

Authors: Org, Tõnis, Hensen, Kati, Kreevan, Rita, Mark, Elina, Sarv, Olav, Andreson, Reidar, Jaakma, Ülle, Salumets, Andres, Kurg, Ants

Source: PLoS ONE; 11/25/2019, Vol. 14 Issue 11, p1-24, 24p

Subject Terms: BLASTOCYST, NUCLEOTIDE sequencing, CELLS, MODIFICATIONS, IMMUNOPRECIPITATION, CHROMATIN

Phenotypic and Molecular Epidemiology of ESBL-, AmpC-, and Carbapenemase-Producing Escherichia coli in Northern and Eastern Europe.

Authors: Sepp, Epp, Andreson, Reidar, Balode, Arta, Bilozor, Anastasia, Brauer, Age, Egorova, Svetlana, Huik, Kristi, Ivanova, Marina, Kaftyreva, Lidia, Kõljalg, Siiri, Kõressaar, Triinu, Makarova, Maria, Miciuleviciene, Jolanta, Pai, Kristiine, Remm, Maido, Rööp, Tiiu, Naaber, Paul

Source: Frontiers in Microbiology; 11/22/2019, Vol. 10, p1-10, 10p

Subject Terms: ESCHERICHIA coli, NUCLEOTIDE sequencing, CARBAPENEMASE, SINGLE nucleotide polymorphisms

Geographic Terms: LATVIA

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Fast Masking of Repeated Primer Binding Sites in Eukaryotic Genomes.

Authors: Walker, John M., Yuryev, Anton, Andreson, Reidar, Kaplinski, Lauris, Remm, Maido

Source: PCR Primer Design; 2007, p201-217, 17p

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GENOMEMASKER package for designing unique genomic PCR primers.

Authors: Andreson, Reidar, Reppo, Eric, Kaplinski, Lauris, Remm, Maido

Source: BMC Bioinformatics; 2006, Vol. 7, p172-11, 11p, 2 Diagrams, 1 Chart, 2 Graphs

Subject Terms: POLYMERASE chain reaction, GENOMICS, GENOMES, EUKARYOTIC cells, BINDING sites, BIOINFORMATICS