A short exposure to a semi-natural habitat alleviates the honey bee hive microbial imbalance caused by agricultural stress

Authors: June Gorrochategui-Ortega, Marta Muñoz-Colmenero, Marin Kovačić, Janja Filipi, Zlatko Puškadija, Nikola Kezić, Melanie Parejo, Ralph Büchler, Andone Estonba, Iratxe Zarraonaindia

Source: Scientific Reports, Vol 12, Iss 1, Pp 1-18 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/467aabfc267a42f5b4773960a2dbfe66

Publisher Correction: A short exposure to a semi-natural habitat alleviates the honey bee hive microbial imbalance caused by agricultural stress

Authors: June Gorrochategui-Ortega, Marta Muñoz-Colmenero, Marin Kovačić, Janja Filipi, Zlatko Puškadija, Nikola Kezić, Melanie Parejo, Ralph Büchler, Andone Estonba, Iratxe Zarraonaindia

Source: Scientific Reports, Vol 12, Iss 1, Pp 1-3 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/1d8d033dad3e461794e4a2e20fbc9eca

Novel strategies to improve chicken performance and welfare by unveiling host-microbiota interactions through hologenomics

Authors: Núria Tous, Sofia Marcos, Farshad Goodarzi Boroojeni, Ana Pérez de Rozas, Jürgen Zentek, Andone Estonba, Dorthe Sandvang, M. Thomas P. Gilbert, Enric Esteve-Garcia, Robert Finn, Antton Alberdi, Joan Tarradas

Source: Frontiers in Physiology, Vol 13 (2022)

Subject Terms: animal performance, genomics, metagenomics, multi-omics, sustainability, Physiology, QP1-981

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fphys.2022.884925/full; https://doaj.org/toc/1664-042X

Access URL: https://doaj.org/article/8f12ce13d211445cb75cdcdda3d31477

Recovering High‐Quality Host Genomes from Gut Metagenomic Data through Genotype Imputation

Authors: Sofia Marcos, Melanie Parejo, Andone Estonba, Antton Alberdi

Source: Advanced Genetics, Vol 3, Iss 3, Pp n/a-n/a (2022)

Subject Terms: host, imputation, metagenomic data, population genetics, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/2641-6573

Access URL: https://doaj.org/article/1b964b2462e64d208814439046ccb89e

Authoritative subspecies diagnosis tool for European honey bees based on ancestry informative SNPs

Authors: Jamal Momeni, Melanie Parejo, Rasmus O. Nielsen, Jorge Langa, Iratxe Montes, Laetitia Papoutsis, Leila Farajzadeh, Christian Bendixen, Eliza Căuia, Jean-Daniel Charrière, Mary F. Coffey, Cecilia Costa, Raffaele Dall’Olio, Pilar De la Rúa, M. Maja Drazic, Janja Filipi, Thomas Galea, Miroljub Golubovski, Ales Gregorc, Karina Grigoryan, Fani Hatjina, Rustem Ilyasov, Evgeniya Ivanova, Irakli Janashia, Irfan Kandemir, Aikaterini Karatasou, Meral Kekecoglu, Nikola Kezic, Enikö Sz. Matray, David Mifsud, Rudolf Moosbeckhofer, Alexei G. Nikolenko, Alexandros Papachristoforou, Plamen Petrov, M. Alice Pinto, Aleksandr V. Poskryakov, Aglyam Y. Sharipov, Adrian Siceanu, M. Ihsan Soysal, Aleksandar Uzunov, Marion Zammit-Mangion, Rikke Vingborg, Maria Bouga, Per Kryger, Marina D. Meixner, Andone Estonba

Source: BMC Genomics, Vol 22, Iss 1, Pp 1-12 (2021)

Subject Terms: Apis mellifera, European subspecies, Conservation, Machine learning, Prediction, Biodiversity, Biotechnology, TP248.13-248.65, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1471-2164

Access URL: https://doaj.org/article/f8bb152fec464208959fd95a34447899

EXFI: Exon and splice graph prediction without a reference genome

Authors: Jorge Langa, Andone Estonba, Darrell Conklin

Source: Ecology and Evolution, Vol 10, Iss 16, Pp 8880-8893 (2020)

Subject Terms: exome sequencing, exon, sequence capture, SNP discovery, splice graph, transcriptome, Ecology, QH540-549.5

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7758

Access URL: https://doaj.org/article/185b7b7ae6f6495cb1a21286036dbfb4

Stress Response to Climate Change and Postharvest Handling in Two Differently Pigmented Lettuce Genotypes: Impact on Alternaria alternata Invasion and Mycotoxin Production

Authors: Jon Miranda-Apodaca, Unai Artetxe, Iratxe Aguado, Leire Martin-Souto, Andoni Ramirez-Garcia, Maite Lacuesta, José María Becerril, Andone Estonba, Amaia Ortiz-Barredo, Antonio Hernández, Iratxe Zarraonaindia, Usue Pérez-López

Source: Plants, Vol 12, Iss 6, p 1304 (2023)

Subject Terms: Alternaria alternata, climate change scenario, defense mechanisms, differently pigmented lettuce, mycotoxins, postharvest handling, Botany, QK1-989

File Description: electronic resource

Relation: https://www.mdpi.com/2223-7747/12/6/1304; https://doaj.org/toc/2223-7747

Access URL: https://doaj.org/article/5ac451c6d0a54060bd2ecf43af58f1c0

Transcriptomic dataset for Sardina pilchardus: Assembly, annotation, and expression of nine tissues

Authors: Jorge Langa, Martin Huret, Iratxe Montes, Darrell Conklin, Andone Estonba

Source: Data in Brief, Vol 39, Iss , Pp 107583- (2021)

Subject Terms: Sardina pilchardus, European sardine, Transcriptome assembly, Annotation, Expression, Tissue quantification, Computer applications to medicine. Medical informatics, R858-859.7, Science (General), Q1-390

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352340921008581; https://doaj.org/toc/2352-3409

Access URL: https://doaj.org/article/0a3605dcd76a4a308cb36e50e7214a85

Genomic selection signatures in sheep from the Western Pyrenees

Authors: Otsanda Ruiz-Larrañaga, Jorge Langa, Fernando Rendo, Carmen Manzano, Mikel Iriondo, Andone Estonba

Source: Genetics Selection Evolution, Vol 50, Iss 1, Pp 1-12 (2018)

Subject Terms: Animal culture, SF1-1100, Genetics, QH426-470

File Description: electronic resource

Relation: http://link.springer.com/article/10.1186/s12711-018-0378-x; https://doaj.org/toc/1297-9686

Access URL: https://doaj.org/article/919fc29ce31144b8951c78099b09c81a

Insights on the drivers of genetic divergence in the European anchovy

Authors: Gaetano Catanese, Romain Watteaux, Iratxe Montes, Marco Barra, Paola Rumolo, Diego Borme, Bruno Buongiorno Nardelli, Vincenzo Botte, Maria Grazia Mazzocchi, Simona Genovese, Iole Di Capua, Mikel Iriondo, Andone Estonba, Paolo Ruggeri, Valentina Tirelli, Vincenzo Caputo-Barucchi, Gualtiero Basilone, Angelo Bonanno, Daniele Iudicone, Gabriele Procaccini

Source: Scientific Reports, Vol 7, Iss 1, Pp 1-15 (2017)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/ca35cc6780b9463387035787954b20d0

Response of Horticultural Soil Microbiota to Different Fertilization Practices

Authors: Iratxe Zarraonaindia, Xabier Simón Martínez-Goñi, Olaia Liñero, Marta Muñoz-Colmenero, Mikel Aguirre, David Abad, Igor Baroja-Careaga, Alberto de Diego, Jack A. Gilbert, Andone Estonba

Source: Plants, Vol 9, Iss 11, p 1501 (2020)

Subject Terms: farming system, 16S rRNA, soil prokaryotes, functional prediction, Botany, QK1-989

File Description: electronic resource

Relation: https://www.mdpi.com/2223-7747/9/11/1501; https://doaj.org/toc/2223-7747

Access URL: https://doaj.org/article/a687e12cae914d11bf8bd081d4e0bbaa

A novel transcriptome-derived SNPs array for tench (Tinca tinca L.).

Authors: Girish Kumar, Jorge Langa, Iratxe Montes, Darrell Conklin, Martin Kocour, Klaus Kohlmann, Andone Estonba

Source: PLoS ONE, Vol 14, Iss 3, p e0213992 (2019)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/e4887562c42f4c7f840aabee5e5a6898

Hygroregulation, a key ability for eusocial insects: Native Western European honeybees as a case study.

Authors: Iris Eouzan, Lionel Garnery, M Alice Pinto, Damien Delalande, Cátia J Neves, Francis Fabre, Jérôme Lesobre, Sylvie Houte, Andone Estonba, Iratxe Montes, Télesphore Sime-Ngando, David G Biron

Source: PLoS ONE, Vol 14, Iss 2, p e0200048 (2019)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/de5538b4a65747a78b8f472c0cea7926

Association between combinations of genetic polymorphisms and epidemiopathogenic forms of bovine paratuberculosis

Authors: Ramon A. Juste, Patricia Vazquez, Otsanda Ruiz-Larrañaga, Mikel Iriondo, Carmen Manzano, Mikel Agirre, Andone Estonba, Maria V. Geijo, Elena Molina, Iker A. Sevilla, Marta Alonso-Hearn, Nieves Gomez, Valentin Perez, Adoracion Cortes, Joseba M. Garrido

Source: Heliyon, Vol 4, Iss 2 (2018)

Subject Terms: Infectious disease, Veterinary medicine, Immunology, Genetics, Science (General), Q1-390, Social sciences (General), H1-99

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2405844017320194; https://doaj.org/toc/2405-8440

Access URL: https://doaj.org/article/446f397370f841d8bdd987d5f803057d

Unraveling the environmental and anthropogenic drivers of bacterial community changes in the Estuary of Bilbao and its tributaries.

Authors: Mikel Aguirre, David Abad, Aitor Albaina, Lauren Cralle, María Soledad Goñi-Urriza, Andone Estonba, Iratxe Zarraonaindia

Source: PLoS ONE, Vol 12, Iss 6, p e0178755 (2017)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC5464593?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/ffbfe65fc2d1413cb63c61c29555eeee

Serological and Genetic Evidence for Altered Complement System Functionality in Systemic Lupus Erythematosus: Findings of the GAPAID Consortium.

Authors: József Prechl, Krisztián Papp, Zoltán Hérincs, Hajna Péterfy, Veronika Lóránd, Zoltán Szittner, Andone Estonba, Paolo Rovero, Ilaria Paolini, Jokin Del Amo, Maria Uribarri, Maria Claudia Alcaro, Otsanda Ruiz-Larrañaga, Paola Migliorini, László Czirják

Source: PLoS ONE, Vol 11, Iss 3, p e0150685 (2016)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/a890a6da11714206b50bfc1b5d70ef13

LDLR and PCSK9 Are Associated with the Presence of Antiphospholipid Antibodies and the Development of Thrombosis in aPLA Carriers.

Authors: Eguzkine Ochoa, Mikel Iriondo, Carmen Manzano, Asier Fullaondo, Irama Villar, Guillermo Ruiz-Irastorza, Ana M Zubiaga, Andone Estonba

Source: PLoS ONE, Vol 11, Iss 1, p e0146990 (2016)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4731066?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/896de7fc4dd8410d948139cf0dfe9c75

New Nuclear SNP Markers Unravel the Genetic Structure and Effective Population Size of Albacore Tuna (Thunnus alalunga).

Authors: Urtzi Laconcha, Mikel Iriondo, Haritz Arrizabalaga, Carmen Manzano, Pablo Markaide, Iratxe Montes, Iratxe Zarraonaindia, Igor Velado, Eider Bilbao, Nicolas Goñi, Josu Santiago, Andrés Domingo, Saadet Karakulak, Işık Oray, Andone Estonba

Source: PLoS ONE, Vol 10, Iss 6, p e0128247 (2015)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC4474438?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/aa45f6a8c3ea40bbbcb34dff5b2b5d60

Genetic Association Analysis of Paratuberculosis Forms in Holstein-Friesian Cattle

Authors: Patricia Vázquez, Otsanda Ruiz-Larrañaga, Joseba M. Garrido, Mikel Iriondo, Carmen Manzano, Mikel Agirre, Andone Estonba, Ramón A. Juste

Source: Veterinary Medicine International, Vol 2014 (2014)

Subject Terms: Veterinary medicine, SF600-1100

File Description: electronic resource

Relation: https://doaj.org/toc/2090-8113; https://doaj.org/toc/2042-0048

Access URL: https://doaj.org/article/a2aed2f3bb8d45b8ba7e10d9d3f9a7d9

SNP discovery in European anchovy (Engraulis encrasicolus, L) by high-throughput transcriptome and genome sequencing.

Authors: Iratxe Montes, Darrell Conklin, Aitor Albaina, Simon Creer, Gary R Carvalho, María Santos, Andone Estonba

Source: PLoS ONE, Vol 8, Iss 8, p e70051 (2013)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: http://europepmc.org/articles/PMC3731364?pdf=render; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/606a1dd2b9324868b5133dbbef2eb4ce