Genomic Signatures of Domestication in European Seabass (Dicentrarchus labrax L.) Reveal a Potential Role for Epigenetic Regulation in Adaptation to Captivity

Authors: Aristotelis Moulistanos, Konstantinos Papasakellariou, Ioannis Kavakiotis, Konstantinos Gkagkavouzis, Nikoleta Karaiskou, Efthimia Antonopoulou, Alexandros Triantafyllidis, Spiros Papakostas

Source: Ecology and Evolution, Vol 14, Iss 12, Pp n/a-n/a (2024)

Subject Terms: artificial selection, domestication genetics, genome‐wide variation, interactome‐assisted pathway analysis, marine teleost, Ecology, QH540-549.5

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7758

Access URL: https://doaj.org/article/460bf986685041c9817db55aa6e2c3ab

SMARTER-database: a tool to integrate SNP array datasets for sheep and goat breeds

Authors: Paolo Cozzi, Arianna Manunza, Johanna Ramirez-Diaz, Valentina Tsartsianidou, Konstantinos Gkagkavouzis, Pablo Peraza, Anna Maria Johansson, Juan José Arranz, Fernando Freire, Szilvia Kusza, Filippo Biscarini, Lucy Peters, Gwenola Tosser-Klopp, Gabriel Ciappesoni, Alexandros Triantafyllidis, Rachel Rupp, Bertrand Servin, Alessandra Stella

Source: GigaByte (2024)

Subject Terms: Electronic computers. Computer science, QA75.5-76.95

File Description: electronic resource

Relation: https://gigabytejournal.com/articles/139; https://doaj.org/toc/2709-4715

Access URL: https://doaj.org/article/899f1293ae2d4d62a141d385727ea5a9

Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture

Authors: Jennifer R. S. Meadows, Jeffrey M. Kidd, Guo-Dong Wang, Heidi G. Parker, Peter Z. Schall, Matteo Bianchi, Matthew J. Christmas, Katia Bougiouri, Reuben M. Buckley, Christophe Hitte, Anthony K. Nguyen, Chao Wang, Vidhya Jagannathan, Julia E. Niskanen, Laurent A. F. Frantz, Meharji Arumilli, Sruthi Hundi, Kerstin Lindblad-Toh, Catarina Ginja, Kadek Karang Agustina, Catherine André, Adam R. Boyko, Brian W. Davis, Michaela Drögemüller, Xin-Yao Feng, Konstantinos Gkagkavouzis, Giorgos Iliopoulos, Alexander C. Harris, Marjo K. Hytönen, Daniela C. Kalthoff, Yan-Hu Liu, Petros Lymberakis, Nikolaos Poulakakis, Ana Elisabete Pires, Fernando Racimo, Fabian Ramos-Almodovar, Peter Savolainen, Semina Venetsani, Imke Tammen, Alexandros Triantafyllidis, Bridgett vonHoldt, Robert K. Wayne, Greger Larson, Frank W. Nicholas, Hannes Lohi, Tosso Leeb, Ya-Ping Zhang, Elaine A. Ostrander

Source: Genome Biology, Vol 24, Iss 1, Pp 1-41 (2023)

Subject Terms: Canine, Dog, Genomics, Variation, Demographic history, Mitochondrial DNA, Biology (General), QH301-705.5, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1474-760X

Access URL: https://doaj.org/article/070c928591184511adb6d4a61799d1db

Author Correction: Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture

Authors: Jennifer R. S. Meadows, Jefrey M. Kidd, Guo-Dong Wang, Heidi G. Parker, Peter Z. Schall, Matteo Bianchi, Matthew J. Christmas, Katia Bougiouri, Reuben M. Buckley, Christophe Hitte, Anthony K. Nguyen, Chao Wang, Vidhya Jagannathan, Julia E. Niskanen, Laurent A. F. Frantz, Meharji Arumilli, Sruthi Hundi, Kerstin Lindblad-Toh, Catarina Ginja, Kadek Karang Agustina, Catherine André, Adam R. Boyko, Brian W. Davis, Michaela Drögemüller, Xin-Yao Feng, Konstantinos Gkagkavouzis, Giorgos Iliopoulos, Alexander C. Harris, Marjo K. Hytönen, Daniela C. Kalthof, Yan-Hu Liu, Petros Lymberakis, Nikolaos Poulakakis, Ana Elisabete Pires, Fernando Racimo, Fabian Ramos-Almodovar, Peter Savolainen, Semina Venetsani, Imke Tammen, Alexandros Triantafyllidis, Bridgett vonHoldt, Robert K. Wayne, Greger Larson, Frank W. Nicholas, Hannes Lohi, Tosso Leeb, Ya-Ping Zhang, Elaine A. Ostrander

Source: Genome Biology, Vol 24, Iss 1, Pp 1-3 (2023)

Subject Terms: Biology (General), QH301-705.5, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1474-760X

Access URL: https://doaj.org/article/9d22509f6da04b749ce4f0889d709eea

Isolation of Listeria monocytogenes from poultry red mite (Dermanyssus gallinae) infesting a backyard chicken farm in Greece

Authors: Georgios Sioutas, Evanthia Petridou, Styliani Minoudi, Konstantinos V. Papageorgiou, Isaia Symeonidou, Ioannis A. Giantsis, Alexandros Triantafyllidis, Elias Papadopoulos

Source: Scientific Reports, Vol 13, Iss 1, Pp 1-8 (2023)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/13eaa07d472647cda6abdd6c7da0885c

A genome-wide association study reveals novel SNP markers associated with resilience traits in two Mediterranean dairy sheep breeds

Authors: Angeliki Argyriadou, Sofia Michailidou, Sotiria Vouraki, Valentina Tsartsianidou, Alexandros Triantafyllidis, Athanasios Gelasakis, Georgios Banos, Georgios Arsenos

Source: Frontiers in Genetics, Vol 14 (2023)

Subject Terms: dairy sheep, Chios breed, Frizarta breed, genome-wide association, resilience, milk somatic cell count, Genetics, QH426-470

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fgene.2023.1294573/full; https://doaj.org/toc/1664-8021

Access URL: https://doaj.org/article/71bde92b3b4a4e9aaff2147e9c4ba00a

Investigating the role of genetic variation in vgll3 and six6 in the domestication of gilthead seabream (Sparus aurata Linnaeus) and European seabass (Dicentrarchus labrax Linnaeus)

Authors: Aristotelis Moulistanos, Theopisti Nikolaou, Smaragda Sismanoglou, Konstantinos Gkagkavouzis, Nikoleta Karaiskou, Efthimia Antonopoulou, Alexandros Triantafyllidis, Spiros Papakostas

Source: Ecology and Evolution, Vol 13, Iss 11, Pp n/a-n/a (2023)

Subject Terms: artificial selection, candidate gene approach, fish farming, genome scans, marine teleost, Ecology, QH540-549.5

File Description: electronic resource

Relation: https://doaj.org/toc/2045-7758

Access URL: https://doaj.org/article/1dffe8272eba4562b535495364e4cb30

Extensive Countrywide Molecular Identification and High Genetic Diversity of Haemonchus spp. in Domestic Ruminants in Greece

Authors: Konstantinos V. Arsenopoulos, Styliani Minoudi, Isaia Symeonidou, Alexandros Triantafyllidis, George C. Fthenakis, Elias Papadopoulos

Source: Pathogens, Vol 13, Iss 3, p 238 (2024)

Subject Terms: Haemonchus contortus, genetic diversity, phylogenetic relationship, domestic ruminants, ITS2 sequence, ND4 gene, Medicine

File Description: electronic resource

Relation: https://www.mdpi.com/2076-0817/13/3/238; https://doaj.org/toc/2076-0817

Access URL: https://doaj.org/article/8979084bf58741b790bb315fb7641749

Genetic diversity of bat species in the cross-border area of Greece and Bulgaria

Authors: Aristotelis Moulistanos, Giorgos Chatzoglou, Nikoletta Karaiskou, Konstantinos Gkagkavouzis, Styliani Minoudi, Ioannis Papoulidis, Charalambos Alivizatos, Maria Panagiotopoulou, Dionisios Youlatos, Maria Tsaktsira, Alexandros Triantafyllidis, Apostolos Scaltsoyiannes

Source: Journal of Biological Research - Thessaloniki, Vol 30, Iss 0 (2023)

Subject Terms: coi gene, miniopterus schreibersii, rhinolophus species, heterozygosity, rhodopi mountain range, balkan peninsula, Biology (General), QH301-705.5

File Description: electronic resource

Relation: https://ejournals.lib.auth.gr/jbiolres/article/view/9024; https://doaj.org/toc/2241-5793

Access URL: https://doaj.org/article/0c74a85aab6045c1a6fd262542c1c455

A comprehensive genome-wide scan detects genomic regions related to local adaptation and climate resilience in Mediterranean domestic sheep

Authors: Valentina Tsartsianidou, Enrique Sánchez-Molano, Vanessa Varvara Kapsona, Zoitsa Basdagianni, Dimitrios Chatziplis, Georgios Arsenos, Alexandros Triantafyllidis, Georgios Banos

Source: Genetics Selection Evolution, Vol 53, Iss 1, Pp 1-17 (2021)

Subject Terms: Animal culture, SF1-1100, Genetics, QH426-470

File Description: electronic resource

Relation: https://doaj.org/toc/1297-9686

Access URL: https://doaj.org/article/0c472726fe54441496a2ac7a13ccbea6

Genetic Identification and Traceability of Insect Meals

Authors: Aristotelis Moulistanos, Nikoleta Karaiskou, Konstantinos Gkagkavouzis, Styliani Minoudi, Elena Drosopoulou, Chrysanthi Ioannidou, Nikolas Panteli, Stella Zografou, Damianos Karaouglanis, Dimitrios Kotouzas, Dimitrios Kontodimas, Efthimia Antonopoulou, Alexandros Triantafyllidis

Source: Insects, Vol 14, Iss 7, p 610 (2023)

Subject Terms: insects, aquafeed, COI gene, cloning, colony PCR, Science

File Description: electronic resource

Relation: https://www.mdpi.com/2075-4450/14/7/610; https://doaj.org/toc/2075-4450

Access URL: https://doaj.org/article/76078592f2e54744815661972db2f6da

Mediterranean Aquaculture and Genetic Pollution: A Review Combined with Data from a Fish Farm Evaluating the Ecological Risks of Finfish Escapes

Authors: Maria V. Alvanou, Konstantinos Gkagkavouzis, Nikoleta Karaiskou, Konstantinos Feidantsis, Athanasios Lattos, Basile Michaelidis, John A. Theodorou, Costas Batargias, Alexandros Triantafyllidis, Ioannis A. Giantsis

Source: Journal of Marine Science and Engineering, Vol 11, Iss 7, p 1405 (2023)

Subject Terms: genetic diversity, Mediterranean Sea, mariculture, gilthead sea bream, sea bass, native fish populations, Naval architecture. Shipbuilding. Marine engineering, VM1-989, Oceanography, GC1-1581

File Description: electronic resource

Relation: https://www.mdpi.com/2077-1312/11/7/1405; https://doaj.org/toc/2077-1312

Access URL: https://doaj.org/article/6aa0b7b037054b51bfc4abe8ed2c0466

Understanding the seasonality of performance resilience to climate volatility in Mediterranean dairy sheep

Authors: Valentina Tsartsianidou, Vanessa Varvara Kapsona, Enrique Sánchez-Molano, Zoitsa Basdagianni, Maria Jesús Carabaño, Dimitrios Chatziplis, Georgios Arsenos, Alexandros Triantafyllidis, Georgios Banos

Source: Scientific Reports, Vol 11, Iss 1, Pp 1-11 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/2045-2322

Access URL: https://doaj.org/article/1d2c4044b9214a72b6614d26e438da4f

DNA barcoding identification of Greek freshwater fishes

Authors: Alexandros Tsoupas, Sofia Papavasileiou, Styliani Minoudi, Konstantinos Gkagkavouzis, Olga Petriki, Dimitra Bobori, Argyrios Sapounidis, Emmanouil Koutrakis, Ioannis Leonardos, Nikoleta Karaiskou, Alexandros Triantafyllidis

Source: PLoS ONE, Vol 17, Iss 1 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8791500/?tool=EBI; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/500489741b304c9090ea3b156f05743e

DNA barcoding identification of Greek freshwater fishes.

Authors: Alexandros Tsoupas, Sofia Papavasileiou, Styliani Minoudi, Konstantinos Gkagkavouzis, Olga Petriki, Dimitra Bobori, Argyrios Sapounidis, Emmanouil Koutrakis, Ioannis Leonardos, Nikoleta Karaiskou, Alexandros Triantafyllidis

Source: PLoS ONE, Vol 17, Iss 1, p e0263118 (2022)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/b93777498ca24c4c96720b355adf24a0

First linkage maps and a pilot QTL analysis for early growth performance in common dentex (Dentex dentex) and sharpsnout seabream (Diplodus puntazzo)

Authors: Stavroula Oikonomou, Alexandros Tsakogiannis, Christina Kriaridou, Theodoros Danis, Tereza Manousaki, Dimitris Chatziplis, Nikos Papandroulakis, Constantinos C. Mylonas, Alexandros Triantafyllidis, Costas S. Tsigenopoulos

Source: Aquaculture Reports, Vol 21, Iss , Pp 100855- (2021)

Subject Terms: Common dentex (Dentex dentex), Sharpsnout seabream (Diplodus puntazzo), QTL analysis, Linkage analysis, Comparative analysis, Aquaculture. Fisheries. Angling, SH1-691

File Description: electronic resource

Relation: http://www.sciencedirect.com/science/article/pii/S2352513421002714; https://doaj.org/toc/2352-5134

Access URL: https://doaj.org/article/99ce875857314eda8500a26b3bfd9b9c

Single nucleotide polymorphisms reveal a genetic cline across the north‐east Atlantic and enable powerful population assignment in the European lobster

Authors: Tom L. Jenkins, Charlie D. Ellis, Alexandros Triantafyllidis, Jamie R. Stevens

Source: Evolutionary Applications, Vol 12, Iss 10, Pp 1881-1899 (2019)

Subject Terms: assignment, connectivity, fisheries, Fluidigm EP1, genetic structure, lobster, Evolution, QH359-425

File Description: electronic resource

Relation: https://doaj.org/toc/1752-4571

Access URL: https://doaj.org/article/1c922dde2f4b423b8df68a4e79471a1f

An unusual case of obstructive uropathy

Authors: Antigoni Xenou, Konstantinos A. Boulas, Maria Nathanailidou, Eytyxia Kyriakidou, Aikaterini Paraskeva, Alexandros Triantafyllidis, Konstantinos Chatzipourganis, Anestis Hatzigeorgiadis

Source: Clinical Case Reports, Vol 9, Iss 8, Pp n/a-n/a (2021)

Subject Terms: hernioplasty, incarceration, inguinal hernia, obstructive uropathy, urinary bladder, Medicine, Medicine (General), R5-920

File Description: electronic resource

Relation: https://doaj.org/toc/2050-0904

Access URL: https://doaj.org/article/0e67e3595126475d829bc5e35a21a14d

Genome-wide analysis clarifies the population genetic structure of wild gilthead sea bream (Sparus aurata).

Authors: Francesco Maroso, Konstantinos Gkagkavouzis, Sabina De Innocentiis, Jasmien Hillen, Fernanda do Prado, Nikoleta Karaiskou, John Bernard Taggart, Adrian Carr, Einar Nielsen, Alexandros Triantafyllidis, Luca Bargelloni, Aquatrace Consortium

Source: PLoS ONE, Vol 16, Iss 1, p e0236230 (2021)

Subject Terms: Medicine, Science

File Description: electronic resource

Relation: https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0236230&type=printable; https://doaj.org/toc/1932-6203

Access URL: https://doaj.org/article/e4c86ca8f0a5446bb6fec624c0894676

Population Genetic Structure and Connectivity of the European Lobster Homarus gammarus in the Adriatic and Mediterranean Seas

Authors: Mišo Pavičić, Iva Žužul, Sanja Matić-Skoko, Alexandros Triantafyllidis, Fabio Grati, Eric D. H. Durieux, Igor Celić, Tanja Šegvić-Bubić

Source: Frontiers in Genetics, Vol 11 (2020)

Subject Terms: gene flow, genetic diversity, population structure, fisheries, microsatellites, mtDNA, Genetics, QH426-470

File Description: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fgene.2020.576023/full; https://doaj.org/toc/1664-8021

Access URL: https://doaj.org/article/5b4cffac624a4c12ae74fb06857d4801